Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SPTLC1O15269 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SPTLC1O15269 DUSP8P5-201ENST00000422884 1815 ntBASIC23.41■■□□□ 1.34
SPTLC1O15269 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.41■■□□□ 1.34
SPTLC1O15269 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
SPTLC1O15269 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.41■■□□□ 1.34
SPTLC1O15269 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SPTLC1O15269 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.41■■□□□ 1.34
SPTLC1O15269 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SPTLC1O15269 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
SPTLC1O15269 LINC01960-201ENST00000563759 1884 ntBASIC23.41■■□□□ 1.34
SPTLC1O15269 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SPTLC1O15269 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SPTLC1O15269 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
SPTLC1O15269 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SPTLC1O15269 OXCT2P1-201ENST00000447263 1535 ntBASIC23.4■■□□□ 1.34
SPTLC1O15269 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SPTLC1O15269 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SPTLC1O15269 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.4■■□□□ 1.34
SPTLC1O15269 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SPTLC1O15269 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SPTLC1O15269 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.4■■□□□ 1.34
SPTLC1O15269 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
SPTLC1O15269 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SPTLC1O15269 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.4■■□□□ 1.34
SPTLC1O15269 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
SPTLC1O15269 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.39■■□□□ 1.34
SPTLC1O15269 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
SPTLC1O15269 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SPTLC1O15269 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.39■■□□□ 1.34
SPTLC1O15269 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SPTLC1O15269 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SPTLC1O15269 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.39■■□□□ 1.33
SPTLC1O15269 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.39■■□□□ 1.33
SPTLC1O15269 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.39■■□□□ 1.33
SPTLC1O15269 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SPTLC1O15269 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SPTLC1O15269 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SPTLC1O15269 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SPTLC1O15269 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.38■■□□□ 1.33
SPTLC1O15269 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SPTLC1O15269 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SPTLC1O15269 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SPTLC1O15269 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.38■■□□□ 1.33
SPTLC1O15269 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.38■■□□□ 1.33
SPTLC1O15269 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SPTLC1O15269 SMUG1P1-201ENST00000590640 811 ntBASIC23.38■■□□□ 1.33
SPTLC1O15269 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.38■■□□□ 1.33
SPTLC1O15269 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.38■■□□□ 1.33
SPTLC1O15269 AC087239.1-201ENST00000622671 572 ntBASIC23.38■■□□□ 1.33
SPTLC1O15269 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SPTLC1O15269 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.38■■□□□ 1.33
SPTLC1O15269 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SPTLC1O15269 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.37■■□□□ 1.33
SPTLC1O15269 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPTLC1O15269 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.37■■□□□ 1.33
SPTLC1O15269 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPTLC1O15269 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPTLC1O15269 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SPTLC1O15269 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SPTLC1O15269 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SPTLC1O15269 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SPTLC1O15269 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.36■■□□□ 1.33
SPTLC1O15269 C9orf163-202ENST00000624034 2573 ntBASIC23.36■■□□□ 1.33
SPTLC1O15269 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
SPTLC1O15269 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
SPTLC1O15269 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.36■■□□□ 1.33
SPTLC1O15269 AC123595.1-201ENST00000440769 1046 ntBASIC23.36■■□□□ 1.33
SPTLC1O15269 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.36■■□□□ 1.33
SPTLC1O15269 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.36■■□□□ 1.33
SPTLC1O15269 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.36■■□□□ 1.33
SPTLC1O15269 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SPTLC1O15269 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.35■■□□□ 1.33
SPTLC1O15269 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
SPTLC1O15269 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
SPTLC1O15269 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
SPTLC1O15269 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPTLC1O15269 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPTLC1O15269 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SPTLC1O15269 DUX4L2-201ENST00000561772 1275 ntBASIC23.35■■□□□ 1.33
SPTLC1O15269 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.35■■□□□ 1.33
SPTLC1O15269 DUX4L6-201ENST00000626483 1275 ntBASIC23.35■■□□□ 1.33
SPTLC1O15269 DUX4L1-201ENST00000627662 1275 ntBASIC23.35■■□□□ 1.33
SPTLC1O15269 DUX4L8-201ENST00000629013 1275 ntBASIC23.35■■□□□ 1.33
SPTLC1O15269 DUX4L3-201ENST00000630187 1275 ntBASIC23.35■■□□□ 1.33
SPTLC1O15269 DUX4L7-201ENST00000630678 1275 ntBASIC23.35■■□□□ 1.33
SPTLC1O15269 DUX4L5-201ENST00000630834 1275 ntBASIC23.35■■□□□ 1.33
SPTLC1O15269 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPTLC1O15269 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPTLC1O15269 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SPTLC1O15269 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.35■■□□□ 1.33
SPTLC1O15269 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SPTLC1O15269 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPTLC1O15269 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SPTLC1O15269 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPTLC1O15269 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SPTLC1O15269 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SPTLC1O15269 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
SPTLC1O15269 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SPTLC1O15269 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms