Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF223E7ERA6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF223E7ERA6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF223E7ERA6 AC079630.1-202ENST00000618127 1840 ntBASIC18.19■□□□□ 0.5
RNF223E7ERA6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF223E7ERA6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF223E7ERA6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF223E7ERA6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF223E7ERA6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF223E7ERA6 TSPY20P-201ENST00000450910 630 ntBASIC18.18■□□□□ 0.5
RNF223E7ERA6 MFSD11-216ENST00000590393 1141 ntBASIC18.18■□□□□ 0.5
RNF223E7ERA6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF223E7ERA6 AL121832.2-201ENST00000610979 668 ntBASIC18.18■□□□□ 0.5
RNF223E7ERA6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF223E7ERA6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF223E7ERA6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF223E7ERA6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RNF223E7ERA6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RNF223E7ERA6 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RNF223E7ERA6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF223E7ERA6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF223E7ERA6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF223E7ERA6 AC083906.2-201ENST00000511578 360 ntBASIC18.16■□□□□ 0.5
RNF223E7ERA6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF223E7ERA6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF223E7ERA6 OXCT2P1-201ENST00000447263 1535 ntBASIC18.16■□□□□ 0.5
RNF223E7ERA6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF223E7ERA6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF223E7ERA6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF223E7ERA6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF223E7ERA6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF223E7ERA6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF223E7ERA6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF223E7ERA6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RNF223E7ERA6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF223E7ERA6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF223E7ERA6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF223E7ERA6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF223E7ERA6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF223E7ERA6 AC104187.1-201ENST00000607510 612 ntBASIC18.15■□□□□ 0.5
RNF223E7ERA6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF223E7ERA6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF223E7ERA6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF223E7ERA6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF223E7ERA6 AC142381.3-201ENST00000568208 1670 ntBASIC18.15■□□□□ 0.5
RNF223E7ERA6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF223E7ERA6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF223E7ERA6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF223E7ERA6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF223E7ERA6 AC142086.2-201ENST00000569753 217 ntBASIC18.14■□□□□ 0.49
RNF223E7ERA6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF223E7ERA6 AL050303.2-201ENST00000619798 666 ntBASIC18.14■□□□□ 0.49
RNF223E7ERA6 AC066615.1-201ENST00000640911 628 ntBASIC18.14■□□□□ 0.49
RNF223E7ERA6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF223E7ERA6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RNF223E7ERA6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF223E7ERA6 AL353803.4-201ENST00000565882 1934 ntBASIC18.13■□□□□ 0.49
RNF223E7ERA6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF223E7ERA6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF223E7ERA6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF223E7ERA6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF223E7ERA6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF223E7ERA6 AC007322.1-201ENST00000426983 750 ntBASIC18.13■□□□□ 0.49
RNF223E7ERA6 TSPY6P-201ENST00000448518 926 ntBASIC18.13■□□□□ 0.49
RNF223E7ERA6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF223E7ERA6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF223E7ERA6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF223E7ERA6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF223E7ERA6 AC231657.2-201ENST00000624556 255 ntBASIC18.13■□□□□ 0.49
RNF223E7ERA6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF223E7ERA6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF223E7ERA6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF223E7ERA6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF223E7ERA6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF223E7ERA6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms