Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LINC00473A8K010 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00473A8K010 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00473A8K010 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
LINC00473A8K010 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00473A8K010 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
LINC00473A8K010 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00473A8K010 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00473A8K010 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.77■□□□□ 0.44
LINC00473A8K010 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00473A8K010 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC00473A8K010 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00473A8K010 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00473A8K010 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC00473A8K010 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC00473A8K010 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LINC00473A8K010 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.77■□□□□ 0.43
LINC00473A8K010 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LINC00473A8K010 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LINC00473A8K010 AL137060.1-201ENST00000618151 2648 ntBASIC17.76■□□□□ 0.43
LINC00473A8K010 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00473A8K010 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00473A8K010 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00473A8K010 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00473A8K010 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00473A8K010 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC00473A8K010 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.76■□□□□ 0.43
LINC00473A8K010 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
LINC00473A8K010 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00473A8K010 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00473A8K010 AC010542.4-201ENST00000563151 1910 ntBASIC17.76■□□□□ 0.43
LINC00473A8K010 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC00473A8K010 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00473A8K010 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00473A8K010 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00473A8K010 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00473A8K010 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00473A8K010 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00473A8K010 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC00473A8K010 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC00473A8K010 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00473A8K010 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC00473A8K010 KRT16P3-201ENST00000439127 1283 ntBASIC17.75■□□□□ 0.43
LINC00473A8K010 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00473A8K010 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC00473A8K010 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.75■□□□□ 0.43
LINC00473A8K010 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.75■□□□□ 0.43
LINC00473A8K010 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00473A8K010 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.75■□□□□ 0.43
LINC00473A8K010 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00473A8K010 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00473A8K010 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LINC00473A8K010 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC00473A8K010 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LINC00473A8K010 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00473A8K010 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00473A8K010 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00473A8K010 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC00473A8K010 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00473A8K010 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LINC00473A8K010 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00473A8K010 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC00473A8K010 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00473A8K010 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC00473A8K010 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00473A8K010 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC00473A8K010 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00473A8K010 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00473A8K010 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00473A8K010 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00473A8K010 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00473A8K010 AC241377.3-202ENST00000626088 1088 ntBASIC17.73■□□□□ 0.43
LINC00473A8K010 AC241585.3-202ENST00000628937 1088 ntBASIC17.73■□□□□ 0.43
LINC00473A8K010 AC245100.8-202ENST00000629247 1058 ntBASIC17.73■□□□□ 0.43
LINC00473A8K010 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.73■□□□□ 0.43
LINC00473A8K010 AL035685.1-201ENST00000636663 812 ntBASIC17.73■□□□□ 0.43
LINC00473A8K010 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC00473A8K010 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC00473A8K010 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00473A8K010 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC00473A8K010 FAM99A-202ENST00000538190 1989 ntBASIC17.73■□□□□ 0.43
LINC00473A8K010 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LINC00473A8K010 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.72■□□□□ 0.43
LINC00473A8K010 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 AC006455.2-201ENST00000429931 906 ntBASIC17.72■□□□□ 0.43
LINC00473A8K010 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LINC00473A8K010 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LINC00473A8K010 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LINC00473A8K010 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.71■□□□□ 0.43
LINC00473A8K010 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LINC00473A8K010 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms