Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 AC080038.3-201ENST00000623346 1952 ntBASIC20.8■□□□□ 0.92
LRIT2A6NDA9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRIT2A6NDA9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 AC008764.7-201ENST00000593779 1081 ntBASIC20.79■□□□□ 0.92
LRIT2A6NDA9 AL031432.3-201ENST00000607698 485 ntBASIC20.79■□□□□ 0.92
LRIT2A6NDA9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRIT2A6NDA9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 AP001330.3-201ENST00000520123 633 ntBASIC20.78■□□□□ 0.92
LRIT2A6NDA9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 AC242852.2-201ENST00000615738 1807 ntBASIC20.78■□□□□ 0.92
LRIT2A6NDA9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LRIT2A6NDA9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 AC087239.1-201ENST00000622671 572 ntBASIC20.77■□□□□ 0.92
LRIT2A6NDA9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRIT2A6NDA9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.77■□□□□ 0.91
LRIT2A6NDA9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 MIR939-201ENST00000401314 82 ntBASIC20.76■□□□□ 0.91
LRIT2A6NDA9 AC010141.3-201ENST00000456659 717 ntBASIC20.76■□□□□ 0.91
LRIT2A6NDA9 SUDS3P1-201ENST00000505831 966 ntBASIC20.76■□□□□ 0.91
LRIT2A6NDA9 AC027682.1-201ENST00000562846 899 ntBASIC20.76■□□□□ 0.91
LRIT2A6NDA9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 AL136967.2-201ENST00000623968 743 ntBASIC20.76■□□□□ 0.91
LRIT2A6NDA9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LRIT2A6NDA9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 AC099791.1-201ENST00000416440 715 ntBASIC20.75■□□□□ 0.91
LRIT2A6NDA9 AC126544.1-201ENST00000580842 1059 ntBASIC20.75■□□□□ 0.91
LRIT2A6NDA9 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 AC139530.1-201ENST00000575312 1977 ntBASIC20.75■□□□□ 0.91
LRIT2A6NDA9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRIT2A6NDA9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 ECEL1P1-201ENST00000373592 1742 ntBASIC20.74■□□□□ 0.91
LRIT2A6NDA9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 AC079089.2-201ENST00000531211 1277 ntBASIC20.74■□□□□ 0.91
LRIT2A6NDA9 AF213884.3-201ENST00000563833 479 ntBASIC20.74■□□□□ 0.91
LRIT2A6NDA9 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.74■□□□□ 0.91
LRIT2A6NDA9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms