Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC31.66■■■□□ 2.66
CCDC144AA2RUR9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CCDC144AA2RUR9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC144AA2RUR9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC144AA2RUR9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC144AA2RUR9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC31.65■■■□□ 2.66
CCDC144AA2RUR9 LINC01960-201ENST00000563759 1884 ntBASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 AC004911.1-201ENST00000416316 871 ntBASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC31.64■■■□□ 2.66
CCDC144AA2RUR9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
CCDC144AA2RUR9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC144AA2RUR9 AC004854.2-201ENST00000608450 1441 ntBASIC31.63■■■□□ 2.65
CCDC144AA2RUR9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC31.63■■■□□ 2.65
CCDC144AA2RUR9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC31.63■■■□□ 2.65
CCDC144AA2RUR9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.63■■■□□ 2.65
CCDC144AA2RUR9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC31.63■■■□□ 2.65
CCDC144AA2RUR9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC144AA2RUR9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CCDC144AA2RUR9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC144AA2RUR9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CCDC144AA2RUR9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC31.62■■■□□ 2.65
CCDC144AA2RUR9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC31.62■■■□□ 2.65
CCDC144AA2RUR9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.62■■■□□ 2.65
CCDC144AA2RUR9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.62■■■□□ 2.65
CCDC144AA2RUR9 AP004607.4-201ENST00000530158 1459 ntBASIC31.62■■■□□ 2.65
CCDC144AA2RUR9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC144AA2RUR9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 AC093323.1-202ENST00000635031 2045 ntBASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC144AA2RUR9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC144AA2RUR9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC144AA2RUR9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC31.59■■■□□ 2.65
CCDC144AA2RUR9 AC006015.1-201ENST00000429970 570 ntBASIC31.59■■■□□ 2.65
CCDC144AA2RUR9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC31.59■■■□□ 2.65
CCDC144AA2RUR9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC31.59■■■□□ 2.65
CCDC144AA2RUR9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC31.58■■■□□ 2.65
CCDC144AA2RUR9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC144AA2RUR9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC144AA2RUR9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC144AA2RUR9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC144AA2RUR9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC144AA2RUR9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC144AA2RUR9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
CCDC144AA2RUR9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC31.57■■■□□ 2.64
CCDC144AA2RUR9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
CCDC144AA2RUR9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC144AA2RUR9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC144AA2RUR9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC144AA2RUR9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 AC005224.4-201ENST00000583262 1652 ntBASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CCDC144AA2RUR9 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC31.54■■■□□ 2.64
CCDC144AA2RUR9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC31.54■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms