Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-4A0A1B0GX49 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 C11orf96-202ENST00000528572 1834 ntBASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 MIR3181-201ENST00000578512 73 ntBASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-4A0A1B0GX49 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 AL138724.1-201ENST00000606771 1088 ntBASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 AL031602.1-201ENST00000633169 911 ntBASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 LINC00565-201ENST00000562710 2331 ntBASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-4A0A1B0GX49 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 OR2I1P-207ENST00000453522 948 ntBASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 CLDN5-201ENST00000403084 2357 ntBASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRBV6-4A0A1B0GX49 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 SYT6-210ENST00000641643 1587 ntBASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-4A0A1B0GX49 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms