Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7-1A0A0G2JEV5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav7-1A0A0G2JEV5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7-1A0A0G2JEV5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7-1A0A0G2JEV5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7-1A0A0G2JEV5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7-1A0A0G2JEV5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav7-1A0A0G2JEV5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav7-1A0A0G2JEV5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7-1A0A0G2JEV5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav7-1A0A0G2JEV5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7-1A0A0G2JEV5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7-1A0A0G2JEV5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Trav7-1A0A0G2JEV5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7-1A0A0G2JEV5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.87□□□□□ -0.03
Trav7-1A0A0G2JEV5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav7-1A0A0G2JEV5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav7-1A0A0G2JEV5 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav7-1A0A0G2JEV5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav7-1A0A0G2JEV5 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.83□□□□□ -0.03
Trav7-1A0A0G2JEV5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav7-1A0A0G2JEV5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav7-1A0A0G2JEV5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav7-1A0A0G2JEV5 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.82□□□□□ -0.04
Trav7-1A0A0G2JEV5 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.82□□□□□ -0.04
Trav7-1A0A0G2JEV5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav7-1A0A0G2JEV5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7-1A0A0G2JEV5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7-1A0A0G2JEV5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7-1A0A0G2JEV5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav7-1A0A0G2JEV5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav7-1A0A0G2JEV5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms