Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 C17orf82-201ENST00000623772 1530 ntBASIC20.38■□□□□ 0.85
RLIMQ9NVW2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 DUX4L4-201ENST00000566884 1269 ntBASIC20.38■□□□□ 0.85
RLIMQ9NVW2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 KRT16P3-201ENST00000439127 1283 ntBASIC20.37■□□□□ 0.85
RLIMQ9NVW2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 FBXW4P1-201ENST00000426721 2239 ntBASIC20.37■□□□□ 0.85
RLIMQ9NVW2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RLIMQ9NVW2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 GUSBP5-201ENST00000418136 578 ntBASIC20.36■□□□□ 0.85
RLIMQ9NVW2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.36■□□□□ 0.85
RLIMQ9NVW2 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.35■□□□□ 0.85
RLIMQ9NVW2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.35■□□□□ 0.85
RLIMQ9NVW2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RLIMQ9NVW2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.33■□□□□ 0.85
RLIMQ9NVW2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RLIMQ9NVW2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.33■□□□□ 0.85
RLIMQ9NVW2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RLIMQ9NVW2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RLIMQ9NVW2 AL024507.2-201ENST00000606070 2574 ntBASIC20.33■□□□□ 0.85
RLIMQ9NVW2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RLIMQ9NVW2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.33■□□□□ 0.85
RLIMQ9NVW2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RLIMQ9NVW2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RLIMQ9NVW2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
RLIMQ9NVW2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 AC004687.1-201ENST00000579003 1625 ntBASIC20.32■□□□□ 0.84
RLIMQ9NVW2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RLIMQ9NVW2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RLIMQ9NVW2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.31■□□□□ 0.84
RLIMQ9NVW2 AL117332.1-201ENST00000622628 974 ntBASIC20.31■□□□□ 0.84
RLIMQ9NVW2 AC009086.3-201ENST00000623486 1008 ntBASIC20.31■□□□□ 0.84
RLIMQ9NVW2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.31■□□□□ 0.84
RLIMQ9NVW2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RLIMQ9NVW2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RLIMQ9NVW2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RLIMQ9NVW2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RLIMQ9NVW2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.3■□□□□ 0.84
RLIMQ9NVW2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms