Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 RARRES2P1-201ENST00000474487 481 ntBASIC21.91■■□□□ 1.1
CPNE1Q99829 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPNE1Q99829 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.91■■□□□ 1.1
CPNE1Q99829 FBXW4P1-201ENST00000426721 2239 ntBASIC21.91■■□□□ 1.1
CPNE1Q99829 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE1Q99829 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.9■■□□□ 1.1
CPNE1Q99829 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CPNE1Q99829 CA15P2-201ENST00000611168 834 ntBASIC21.9■■□□□ 1.1
CPNE1Q99829 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
CPNE1Q99829 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE1Q99829 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.89■■□□□ 1.1
CPNE1Q99829 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE1Q99829 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.89■■□□□ 1.1
CPNE1Q99829 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE1Q99829 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
CPNE1Q99829 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.89■■□□□ 1.09
CPNE1Q99829 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.89■■□□□ 1.09
CPNE1Q99829 TSPY9P-201ENST00000440215 945 ntBASIC21.89■■□□□ 1.09
CPNE1Q99829 TSPY11P-201ENST00000442607 1045 ntBASIC21.89■■□□□ 1.09
CPNE1Q99829 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.89■■□□□ 1.09
CPNE1Q99829 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE1Q99829 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPNE1Q99829 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
CPNE1Q99829 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CPNE1Q99829 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE1Q99829 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE1Q99829 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE1Q99829 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE1Q99829 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.88■■□□□ 1.09
CPNE1Q99829 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE1Q99829 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.88■■□□□ 1.09
CPNE1Q99829 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.88■■□□□ 1.09
CPNE1Q99829 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.88■■□□□ 1.09
CPNE1Q99829 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE1Q99829 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE1Q99829 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE1Q99829 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.87■■□□□ 1.09
CPNE1Q99829 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE1Q99829 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE1Q99829 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE1Q99829 AC009299.2-201ENST00000482477 511 ntBASIC21.87■■□□□ 1.09
CPNE1Q99829 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE1Q99829 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE1Q99829 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.86■■□□□ 1.09
CPNE1Q99829 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.86■■□□□ 1.09
CPNE1Q99829 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE1Q99829 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.86■■□□□ 1.09
CPNE1Q99829 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE1Q99829 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE1Q99829 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CPNE1Q99829 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.86■■□□□ 1.09
CPNE1Q99829 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CPNE1Q99829 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPNE1Q99829 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE1Q99829 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE1Q99829 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE1Q99829 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE1Q99829 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE1Q99829 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE1Q99829 AL499627.2-201ENST00000606283 725 ntBASIC21.85■■□□□ 1.09
CPNE1Q99829 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE1Q99829 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPNE1Q99829 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.85■■□□□ 1.09
CPNE1Q99829 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CPNE1Q99829 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE1Q99829 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CPNE1Q99829 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE1Q99829 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE1Q99829 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE1Q99829 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.84■■□□□ 1.09
CPNE1Q99829 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE1Q99829 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE1Q99829 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPNE1Q99829 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CPNE1Q99829 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE1Q99829 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.83■■□□□ 1.09
CPNE1Q99829 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.83■■□□□ 1.09
CPNE1Q99829 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE1Q99829 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPNE1Q99829 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.83■■□□□ 1.09
CPNE1Q99829 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.83■■□□□ 1.08
CPNE1Q99829 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPNE1Q99829 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE1Q99829 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE1Q99829 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CPNE1Q99829 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CPNE1Q99829 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms