Protein–RNA interactions for Protein: Q99717

SMAD5, Mothers against decapentaplegic homolog 5, humanhuman

Known RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5Q99717 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD5Q99717 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.63■□□□□ 0.89
SMAD5Q99717 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD5Q99717 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMAD5Q99717 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD5Q99717 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD5Q99717 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.63■□□□□ 0.89
SMAD5Q99717 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.63■□□□□ 0.89
SMAD5Q99717 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD5Q99717 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD5Q99717 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SMAD5Q99717 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMAD5Q99717 DUX4L2-201ENST00000561772 1275 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD5Q99717 AL354811.1-201ENST00000610286 706 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
SMAD5Q99717 DUX4L6-201ENST00000626483 1275 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 DUX4L1-201ENST00000627662 1275 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 DUX4L8-201ENST00000629013 1275 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 DUX4L3-201ENST00000630187 1275 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 DUX4L7-201ENST00000630678 1275 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 DUX4L5-201ENST00000630834 1275 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 AC004812.2-201ENST00000611079 2094 ntBASIC20.63■□□□□ 0.89
SMAD5Q99717 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMAD5Q99717 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD5Q99717 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD5Q99717 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
SMAD5Q99717 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
SMAD5Q99717 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.62■□□□□ 0.89
SMAD5Q99717 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.62■□□□□ 0.89
SMAD5Q99717 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD5Q99717 AL499627.2-201ENST00000606283 725 ntBASIC20.62■□□□□ 0.89
SMAD5Q99717 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD5Q99717 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.62■□□□□ 0.89
SMAD5Q99717 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.62■□□□□ 0.89
SMAD5Q99717 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.62■□□□□ 0.89
SMAD5Q99717 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.62■□□□□ 0.89
SMAD5Q99717 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD5Q99717 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SMAD5Q99717 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD5Q99717 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMAD5Q99717 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMAD5Q99717 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SMAD5Q99717 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.61■□□□□ 0.89
SMAD5Q99717 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD5Q99717 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD5Q99717 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.61■□□□□ 0.89
SMAD5Q99717 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMAD5Q99717 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD5Q99717 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD5Q99717 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.61■□□□□ 0.89
SMAD5Q99717 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.61■□□□□ 0.89
SMAD5Q99717 AC090192.1-201ENST00000517740 490 ntBASIC20.61■□□□□ 0.89
SMAD5Q99717 AC012414.1-201ENST00000556676 535 ntBASIC20.61■□□□□ 0.89
SMAD5Q99717 IKBKGP1-201ENST00000612193 1073 ntBASIC20.61■□□□□ 0.89
SMAD5Q99717 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.61■□□□□ 0.89
SMAD5Q99717 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMAD5Q99717 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMAD5Q99717 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.6■□□□□ 0.89
SMAD5Q99717 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.6■□□□□ 0.89
SMAD5Q99717 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
SMAD5Q99717 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.6■□□□□ 0.89
SMAD5Q99717 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.6■□□□□ 0.89
SMAD5Q99717 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.6■□□□□ 0.89
SMAD5Q99717 AL137784.2-201ENST00000607332 1000 ntBASIC20.6■□□□□ 0.89
SMAD5Q99717 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.6■□□□□ 0.89
SMAD5Q99717 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMAD5Q99717 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SMAD5Q99717 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.59■□□□□ 0.89
SMAD5Q99717 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD5Q99717 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD5Q99717 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.59■□□□□ 0.89
SMAD5Q99717 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMAD5Q99717 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SMAD5Q99717 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SMAD5Q99717 FP325331.1-202ENST00000623531 1380 ntBASIC20.59■□□□□ 0.89
SMAD5Q99717 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD5Q99717 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.58■□□□□ 0.89
SMAD5Q99717 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.58■□□□□ 0.89
SMAD5Q99717 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD5Q99717 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD5Q99717 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SMAD5Q99717 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SMAD5Q99717 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD5Q99717 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.58■□□□□ 0.89
SMAD5Q99717 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.58■□□□□ 0.89
SMAD5Q99717 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.58■□□□□ 0.89
SMAD5Q99717 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMAD5Q99717 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMAD5Q99717 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SMAD5Q99717 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms