Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
LYSMD1Q96S90 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD1Q96S90 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LYSMD1Q96S90 AC068473.5-201ENST00000616428 2072 ntBASIC21.87■■□□□ 1.09
LYSMD1Q96S90 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD1Q96S90 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD1Q96S90 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.87■■□□□ 1.09
LYSMD1Q96S90 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.87■■□□□ 1.09
LYSMD1Q96S90 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD1Q96S90 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD1Q96S90 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD1Q96S90 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD1Q96S90 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 TSPY26P-201ENST00000476365 1326 ntBASIC21.86■■□□□ 1.09
LYSMD1Q96S90 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 AC105265.2-201ENST00000467189 838 ntBASIC21.86■■□□□ 1.09
LYSMD1Q96S90 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
LYSMD1Q96S90 OXCT2P1-201ENST00000447263 1535 ntBASIC21.85■■□□□ 1.09
LYSMD1Q96S90 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD1Q96S90 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD1Q96S90 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LYSMD1Q96S90 MIR572-201ENST00000384983 95 ntBASIC21.83■■□□□ 1.09
LYSMD1Q96S90 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.83■■□□□ 1.09
LYSMD1Q96S90 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.83■■□□□ 1.09
LYSMD1Q96S90 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.83■■□□□ 1.09
LYSMD1Q96S90 AC127496.7-201ENST00000625110 1798 ntBASIC21.83■■□□□ 1.09
LYSMD1Q96S90 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.83■■□□□ 1.08
LYSMD1Q96S90 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD1Q96S90 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
LYSMD1Q96S90 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD1Q96S90 AC019069.1-201ENST00000610008 1333 ntBASIC21.82■■□□□ 1.08
LYSMD1Q96S90 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.82■■□□□ 1.08
LYSMD1Q96S90 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD1Q96S90 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.81■■□□□ 1.08
LYSMD1Q96S90 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.81■■□□□ 1.08
LYSMD1Q96S90 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LYSMD1Q96S90 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LYSMD1Q96S90 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.81■■□□□ 1.08
LYSMD1Q96S90 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.81■■□□□ 1.08
LYSMD1Q96S90 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 AC137767.1-201ENST00000602918 1920 ntBASIC21.8■■□□□ 1.08
LYSMD1Q96S90 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 AC079089.2-201ENST00000531211 1277 ntBASIC21.8■■□□□ 1.08
LYSMD1Q96S90 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD1Q96S90 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms