Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GAFA1Q96PS6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 AC027682.1-201ENST00000562846 899 ntBASIC18.25■□□□□ 0.51
GAFA1Q96PS6 AF213884.3-201ENST00000563833 479 ntBASIC18.25■□□□□ 0.51
GAFA1Q96PS6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
GAFA1Q96PS6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 AC068587.7-201ENST00000641602 218 ntBASIC18.24■□□□□ 0.51
GAFA1Q96PS6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
GAFA1Q96PS6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 MIR638-201ENST00000385237 100 ntBASIC18.23■□□□□ 0.51
GAFA1Q96PS6 MIR939-201ENST00000401314 82 ntBASIC18.23■□□□□ 0.51
GAFA1Q96PS6 AC099791.1-201ENST00000416440 715 ntBASIC18.23■□□□□ 0.51
GAFA1Q96PS6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GAFA1Q96PS6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 AC127496.7-201ENST00000625110 1798 ntBASIC18.22■□□□□ 0.51
GAFA1Q96PS6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 AC233723.2-201ENST00000623798 2106 ntBASIC18.22■□□□□ 0.51
GAFA1Q96PS6 AP005435.1-201ENST00000529293 1178 ntBASIC18.22■□□□□ 0.51
GAFA1Q96PS6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 CA15P2-201ENST00000611168 834 ntBASIC18.22■□□□□ 0.51
GAFA1Q96PS6 AC005837.3-201ENST00000612163 286 ntBASIC18.22■□□□□ 0.51
GAFA1Q96PS6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
GAFA1Q96PS6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 SUDS3P1-201ENST00000505831 966 ntBASIC18.21■□□□□ 0.51
GAFA1Q96PS6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 AC126544.1-201ENST00000580842 1059 ntBASIC18.21■□□□□ 0.51
GAFA1Q96PS6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 AC087239.1-201ENST00000622671 572 ntBASIC18.21■□□□□ 0.51
GAFA1Q96PS6 AL136967.2-201ENST00000623968 743 ntBASIC18.21■□□□□ 0.51
GAFA1Q96PS6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
GAFA1Q96PS6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GAFA1Q96PS6 AC091305.1-201ENST00000479476 895 ntBASIC18.2■□□□□ 0.5
GAFA1Q96PS6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms