Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx6Q8C7R7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx6Q8C7R7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Gm5812-201ENSMUST00000061073 957 ntBASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx6Q8C7R7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx6Q8C7R7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx6Q8C7R7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.7■□□□□ 0.74
Rfx6Q8C7R7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.7■□□□□ 0.74
Rfx6Q8C7R7 Gm15546-201ENSMUST00000122095 826 ntBASIC19.7■□□□□ 0.74
Rfx6Q8C7R7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx6Q8C7R7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx6Q8C7R7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx6Q8C7R7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rfx6Q8C7R7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx6Q8C7R7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx6Q8C7R7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 AA386476-201ENSMUST00000098781 1665 ntBASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx6Q8C7R7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx6Q8C7R7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rfx6Q8C7R7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms