Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.88■■□□□ 1.41
CNKSR3Q6P9H4 OXCT2P1-201ENST00000447263 1535 ntBASIC23.88■■□□□ 1.41
CNKSR3Q6P9H4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CNKSR3Q6P9H4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CNKSR3Q6P9H4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.87■■□□□ 1.41
CNKSR3Q6P9H4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
CNKSR3Q6P9H4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.86■■□□□ 1.41
CNKSR3Q6P9H4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.86■■□□□ 1.41
CNKSR3Q6P9H4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CNKSR3Q6P9H4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CNKSR3Q6P9H4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.86■■□□□ 1.41
CNKSR3Q6P9H4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.86■■□□□ 1.41
CNKSR3Q6P9H4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.86■■□□□ 1.41
CNKSR3Q6P9H4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 MFSD11-216ENST00000590393 1141 ntBASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.85■■□□□ 1.41
CNKSR3Q6P9H4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 TMEM191A-211ENST00000637163 1067 ntBASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CNKSR3Q6P9H4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.83■■□□□ 1.41
CNKSR3Q6P9H4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CNKSR3Q6P9H4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.83■■□□□ 1.4
CNKSR3Q6P9H4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CNKSR3Q6P9H4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.82■■□□□ 1.4
CNKSR3Q6P9H4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 CD99P1-205ENST00000527459 561 ntBASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 AC142086.2-201ENST00000569753 217 ntBASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 AL121832.2-201ENST00000610979 668 ntBASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CNKSR3Q6P9H4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.8■■□□□ 1.4
CNKSR3Q6P9H4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 AL353803.4-201ENST00000565882 1934 ntBASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CNKSR3Q6P9H4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNKSR3Q6P9H4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CNKSR3Q6P9H4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNKSR3Q6P9H4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNKSR3Q6P9H4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.78■■□□□ 1.4
CNKSR3Q6P9H4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CNKSR3Q6P9H4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.78■■□□□ 1.4
CNKSR3Q6P9H4 AC104187.1-201ENST00000607510 612 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms