Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.5■■□□□ 1.51
SWSAP1Q6NVH7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SWSAP1Q6NVH7 AC087239.1-201ENST00000622671 572 ntBASIC24.5■■□□□ 1.51
SWSAP1Q6NVH7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SWSAP1Q6NVH7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SWSAP1Q6NVH7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.5■■□□□ 1.51
SWSAP1Q6NVH7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
SWSAP1Q6NVH7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
SWSAP1Q6NVH7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SWSAP1Q6NVH7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.49■■□□□ 1.51
SWSAP1Q6NVH7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
SWSAP1Q6NVH7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SWSAP1Q6NVH7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.48■■□□□ 1.51
SWSAP1Q6NVH7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SWSAP1Q6NVH7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.48■■□□□ 1.51
SWSAP1Q6NVH7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.48■■□□□ 1.51
SWSAP1Q6NVH7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SWSAP1Q6NVH7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.48■■□□□ 1.51
SWSAP1Q6NVH7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.48■■□□□ 1.51
SWSAP1Q6NVH7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SWSAP1Q6NVH7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 AC123595.1-201ENST00000440769 1046 ntBASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 AL162430.1-201ENST00000480705 870 ntBASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.47■■□□□ 1.51
SWSAP1Q6NVH7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SWSAP1Q6NVH7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.46■■□□□ 1.51
SWSAP1Q6NVH7 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.46■■□□□ 1.51
SWSAP1Q6NVH7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SWSAP1Q6NVH7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SWSAP1Q6NVH7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.46■■□□□ 1.51
SWSAP1Q6NVH7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
SWSAP1Q6NVH7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
SWSAP1Q6NVH7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.45■■□□□ 1.51
SWSAP1Q6NVH7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SWSAP1Q6NVH7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
SWSAP1Q6NVH7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.45■■□□□ 1.5
SWSAP1Q6NVH7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SWSAP1Q6NVH7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SWSAP1Q6NVH7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.45■■□□□ 1.5
SWSAP1Q6NVH7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.45■■□□□ 1.5
SWSAP1Q6NVH7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.45■■□□□ 1.5
SWSAP1Q6NVH7 OXCT2P1-201ENST00000447263 1535 ntBASIC24.45■■□□□ 1.5
SWSAP1Q6NVH7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 AC034268.1-201ENST00000441047 882 ntBASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 AC092666.2-201ENST00000613287 246 ntBASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SWSAP1Q6NVH7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
SWSAP1Q6NVH7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 DUX4L2-201ENST00000561772 1275 ntBASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 SMUG1P1-201ENST00000590640 811 ntBASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 DUX4L6-201ENST00000626483 1275 ntBASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 DUX4L1-201ENST00000627662 1275 ntBASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 DUX4L8-201ENST00000629013 1275 ntBASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 DUX4L3-201ENST00000630187 1275 ntBASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 DUX4L7-201ENST00000630678 1275 ntBASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 DUX4L5-201ENST00000630834 1275 ntBASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SWSAP1Q6NVH7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SWSAP1Q6NVH7 LINC01960-201ENST00000563759 1884 ntBASIC24.41■■□□□ 1.5
SWSAP1Q6NVH7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SWSAP1Q6NVH7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SWSAP1Q6NVH7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SWSAP1Q6NVH7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SWSAP1Q6NVH7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
SWSAP1Q6NVH7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms