Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.39■■□□□ 1.66
KRT40Q6A162 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
KRT40Q6A162 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
KRT40Q6A162 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
KRT40Q6A162 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
KRT40Q6A162 AC133637.1-201ENST00000624115 1537 ntBASIC25.38■■□□□ 1.65
KRT40Q6A162 ECEL1P1-201ENST00000373592 1742 ntBASIC25.38■■□□□ 1.65
KRT40Q6A162 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
KRT40Q6A162 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
KRT40Q6A162 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.38■■□□□ 1.65
KRT40Q6A162 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.38■■□□□ 1.65
KRT40Q6A162 MIR3181-201ENST00000578512 73 ntBASIC25.38■■□□□ 1.65
KRT40Q6A162 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KRT40Q6A162 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KRT40Q6A162 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.38■■□□□ 1.65
KRT40Q6A162 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
KRT40Q6A162 AC080038.3-201ENST00000623346 1952 ntBASIC25.38■■□□□ 1.65
KRT40Q6A162 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
KRT40Q6A162 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
KRT40Q6A162 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KRT40Q6A162 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
KRT40Q6A162 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KRT40Q6A162 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KRT40Q6A162 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
KRT40Q6A162 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KRT40Q6A162 AL136162.1-201ENST00000607711 1078 ntBASIC25.37■■□□□ 1.65
KRT40Q6A162 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.37■■□□□ 1.65
KRT40Q6A162 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.37■■□□□ 1.65
KRT40Q6A162 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
KRT40Q6A162 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.36■■□□□ 1.65
KRT40Q6A162 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
KRT40Q6A162 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
KRT40Q6A162 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
KRT40Q6A162 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
KRT40Q6A162 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.36■■□□□ 1.65
KRT40Q6A162 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
KRT40Q6A162 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
KRT40Q6A162 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
KRT40Q6A162 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
KRT40Q6A162 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.35■■□□□ 1.65
KRT40Q6A162 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KRT40Q6A162 AC242852.2-201ENST00000615738 1807 ntBASIC25.35■■□□□ 1.65
KRT40Q6A162 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KRT40Q6A162 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KRT40Q6A162 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
KRT40Q6A162 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
KRT40Q6A162 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
KRT40Q6A162 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.35■■□□□ 1.65
KRT40Q6A162 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KRT40Q6A162 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.35■■□□□ 1.65
KRT40Q6A162 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
KRT40Q6A162 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.35■■□□□ 1.65
KRT40Q6A162 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
KRT40Q6A162 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
KRT40Q6A162 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
KRT40Q6A162 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
KRT40Q6A162 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KRT40Q6A162 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
KRT40Q6A162 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
KRT40Q6A162 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
KRT40Q6A162 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KRT40Q6A162 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KRT40Q6A162 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.34■■□□□ 1.65
KRT40Q6A162 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
KRT40Q6A162 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
KRT40Q6A162 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KRT40Q6A162 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
KRT40Q6A162 LINC00526-201ENST00000581067 1875 ntBASIC25.34■■□□□ 1.65
KRT40Q6A162 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KRT40Q6A162 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
KRT40Q6A162 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.33■■□□□ 1.65
KRT40Q6A162 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
KRT40Q6A162 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
KRT40Q6A162 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.33■■□□□ 1.65
KRT40Q6A162 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.32■■□□□ 1.64
KRT40Q6A162 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KRT40Q6A162 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KRT40Q6A162 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
KRT40Q6A162 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KRT40Q6A162 AC105265.2-201ENST00000467189 838 ntBASIC25.32■■□□□ 1.64
KRT40Q6A162 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
KRT40Q6A162 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
KRT40Q6A162 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.32■■□□□ 1.64
KRT40Q6A162 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.32■■□□□ 1.64
KRT40Q6A162 AC139530.1-201ENST00000575312 1977 ntBASIC25.32■■□□□ 1.64
KRT40Q6A162 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
KRT40Q6A162 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
KRT40Q6A162 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.31■■□□□ 1.64
KRT40Q6A162 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
KRT40Q6A162 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
KRT40Q6A162 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
KRT40Q6A162 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.31■■□□□ 1.64
KRT40Q6A162 AC092171.4-201ENST00000609130 632 ntBASIC25.31■■□□□ 1.64
KRT40Q6A162 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.31■■□□□ 1.64
KRT40Q6A162 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KRT40Q6A162 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.31■■□□□ 1.64
KRT40Q6A162 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
KRT40Q6A162 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
KRT40Q6A162 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.3■■□□□ 1.64
KRT40Q6A162 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms