Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 UTP11YKL099C 753 nt4.24□□□□□ -1.73
RPA49Q01080 MRPL20YKR085C 588 nt4.24□□□□□ -1.73
RPA49Q01080 YML119WYML119W 1074 nt4.24□□□□□ -1.73
RPA49Q01080 YMR306C-AYMR306C-A 390 nt4.24□□□□□ -1.73
RPA49Q01080 snR19snR19 568 nt4.24□□□□□ -1.73
RPA49Q01080 GZF3YJL110C 1656 nt4.24□□□□□ -1.73
RPA49Q01080 SSH1YBR283C 1473 nt4.24□□□□□ -1.73
RPA49Q01080 TDA3YHR009C 1572 nt4.23□□□□□ -1.73
RPA49Q01080 YDR290WYDR290W 330 nt4.23□□□□□ -1.73
RPA49Q01080 MPC1YGL080W 393 nt4.23□□□□□ -1.73
RPA49Q01080 POP6YGR030C 477 nt4.23□□□□□ -1.73
RPA49Q01080 YGR149WYGR149W 1299 nt4.23□□□□□ -1.73
RPA49Q01080 CDC73YLR418C 1182 nt4.23□□□□□ -1.73
RPA49Q01080 RET3YPL010W 570 nt4.23□□□□□ -1.73
RPA49Q01080 RPL19AYBR084C-A 570 nt4.23□□□□□ -1.73
RPA49Q01080 YBR225WYBR225W 2703 nt4.23□□□□□ -1.73
RPA49Q01080 SWP82YFL049W 1872 nt4.23□□□□□ -1.73
RPA49Q01080 THI20YOL055C 1656 nt4.22□□□□□ -1.73
RPA49Q01080 MDM30YLR368W 1797 nt4.22□□□□□ -1.73
RPA49Q01080 GDE1YPL110C 3672 nt4.22□□□□□ -1.73
RPA49Q01080 USA1YML029W 2517 nt4.22□□□□□ -1.73
RPA49Q01080 YCL075WYCL075W 441 nt4.22□□□□□ -1.73
RPA49Q01080 YDR230WYDR230W 348 nt4.22□□□□□ -1.73
RPA49Q01080 PRE9YGR135W 777 nt4.22□□□□□ -1.73
RPA49Q01080 MMM1YLL006W 1281 nt4.22□□□□□ -1.73
RPA49Q01080 RPL18BYNL301C 561 nt4.22□□□□□ -1.73
RPA49Q01080 YBR056W-AYBR056W-A 201 nt4.22□□□□□ -1.73
RPA49Q01080 BMT2YBR141C 1014 nt4.22□□□□□ -1.73
RPA49Q01080 YBR255C-AYBR255C-A 363 nt4.22□□□□□ -1.73
RPA49Q01080 HOM3YER052C 1584 nt4.22□□□□□ -1.73
RPA49Q01080 GSM1YJL103C 1857 nt4.22□□□□□ -1.73
RPA49Q01080 OPT2YPR194C 2634 nt4.22□□□□□ -1.73
RPA49Q01080 TRM44YPL030W 1704 nt4.21□□□□□ -1.73
RPA49Q01080 SPB4YFL002C 1821 nt4.21□□□□□ -1.74
RPA49Q01080 RPL8AYHL033C 771 nt4.21□□□□□ -1.74
RPA49Q01080 GPI2YPL076W 843 nt4.21□□□□□ -1.74
RPA49Q01080 NTA1YJR062C 1374 nt4.21□□□□□ -1.74
RPA49Q01080 CLN2YPL256C 1638 nt4.21□□□□□ -1.74
RPA49Q01080 SPS2YDR522C 1509 nt4.21□□□□□ -1.74
RPA49Q01080 ADH4YGL256W 1149 nt4.2□□□□□ -1.74
RPA49Q01080 COS12YGL263W 1143 nt4.2□□□□□ -1.74
RPA49Q01080 CDC12YHR107C 1224 nt4.2□□□□□ -1.74
RPA49Q01080 FUR1YHR128W 651 nt4.2□□□□□ -1.74
RPA49Q01080 BET1YIL004C 429 nt4.2□□□□□ -1.74
RPA49Q01080 ARC15YIL062C 465 nt4.2□□□□□ -1.74
RPA49Q01080 YKL162C-AYKL162C-A 153 nt4.2□□□□□ -1.74
RPA49Q01080 YBL094CYBL094C 333 nt4.2□□□□□ -1.74
RPA49Q01080 IAH1YOR126C 717 nt4.2□□□□□ -1.74
RPA49Q01080 IRC14YOR135C 342 nt4.2□□□□□ -1.74
RPA49Q01080 YER077CYER077C 2067 nt4.2□□□□□ -1.74
RPA49Q01080 RDH54YBR073W 2877 nt4.2□□□□□ -1.74
RPA49Q01080 DID4YKL002W 699 nt4.19□□□□□ -1.74
RPA49Q01080 YBL059WYBL059W 582 nt4.19□□□□□ -1.74
RPA49Q01080 ACE2YLR131C 2313 nt4.19□□□□□ -1.74
RPA49Q01080 YPK9YOR291W 4419 nt4.19□□□□□ -1.74
RPA49Q01080 GWT1YJL091C 1473 nt4.18□□□□□ -1.74
RPA49Q01080 IGO2YHR132W-A 396 nt4.18□□□□□ -1.74
RPA49Q01080 ISA1YLL027W 753 nt4.18□□□□□ -1.74
RPA49Q01080 TIF34YMR146C 1044 nt4.18□□□□□ -1.74
RPA49Q01080 YNL144W-AYNL144W-A 84 nt4.18□□□□□ -1.74
RPA49Q01080 YOL166CYOL166C 339 nt4.18□□□□□ -1.74
RPA49Q01080 PNT1YOR266W 1272 nt4.18□□□□□ -1.74
RPA49Q01080 SRP72YPL210C 1923 nt4.18□□□□□ -1.74
RPA49Q01080 MSN4YKL062W 1893 nt4.18□□□□□ -1.74
RPA49Q01080 GRC3YLL035W 1899 nt4.18□□□□□ -1.74
RPA49Q01080 YPL260WYPL260W 1656 nt4.17□□□□□ -1.74
RPA49Q01080 YGL088WYGL088W 366 nt4.17□□□□□ -1.74
RPA49Q01080 SRB5YGR104C 924 nt4.17□□□□□ -1.74
RPA49Q01080 ECM34YHL043W 513 nt4.17□□□□□ -1.74
RPA49Q01080 IMP3YHR148W 552 nt4.17□□□□□ -1.74
RPA49Q01080 FMC1YIL098C 468 nt4.17□□□□□ -1.74
RPA49Q01080 NIT3YLR351C 876 nt4.17□□□□□ -1.74
RPA49Q01080 IMP2YMR035W 534 nt4.17□□□□□ -1.74
RPA49Q01080 IBD2YNL164C 1056 nt4.17□□□□□ -1.74
RPA49Q01080 PWR1PWR1 941 nt4.17□□□□□ -1.74
RPA49Q01080 GRX1YCL035C 333 nt4.17□□□□□ -1.74
RPA49Q01080 FAR8YMR029C 1572 nt4.17□□□□□ -1.74
RPA49Q01080 MSA1YOR066W 1890 nt4.17□□□□□ -1.74
RPA49Q01080 IZH3YLR023C 1632 nt4.17□□□□□ -1.74
RPA49Q01080 SLX8YER116C 825 nt4.16□□□□□ -1.74
RPA49Q01080 WSS1YHR134W 810 nt4.16□□□□□ -1.74
RPA49Q01080 NCE102YPR149W 522 nt4.16□□□□□ -1.74
RPA49Q01080 FDC1YDR539W 1512 nt4.16□□□□□ -1.74
RPA49Q01080 BUD6YLR319C 2367 nt4.16□□□□□ -1.74
RPA49Q01080 TIF4632YGL049C 2745 nt4.15□□□□□ -1.74
RPA49Q01080 YDR391CYDR391C 699 nt4.15□□□□□ -1.75
RPA49Q01080 DCV1YFR012W 609 nt4.15□□□□□ -1.75
RPA49Q01080 KEG1YFR042W 603 nt4.15□□□□□ -1.75
RPA49Q01080 CNN1YFR046C 1086 nt4.15□□□□□ -1.75
RPA49Q01080 CLC1YGR167W 702 nt4.15□□□□□ -1.75
RPA49Q01080 HIS5YIL116W 1158 nt4.15□□□□□ -1.75
RPA49Q01080 TFA2YKR062W 987 nt4.15□□□□□ -1.75
RPA49Q01080 YMR178WYMR178W 825 nt4.15□□□□□ -1.75
RPA49Q01080 AAH1YNL141W 1044 nt4.15□□□□□ -1.75
RPA49Q01080 POP3YNL282W 588 nt4.15□□□□□ -1.75
RPA49Q01080 GLO3YER122C 1482 nt4.15□□□□□ -1.75
RPA49Q01080 CTR86YCR054C 1692 nt4.15□□□□□ -1.75
RPA49Q01080 PDR5YOR153W 4536 nt4.15□□□□□ -1.75
RPA49Q01080 MNN1YER001W 2289 nt4.15□□□□□ -1.75
RPA49Q01080 YLR345WYLR345W 1530 nt4.15□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms