Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM11AP58511 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM11AP58511 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM11AP58511 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMIM11AP58511 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.17■□□□□ 0.82
SMIM11AP58511 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM11AP58511 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.16■□□□□ 0.82
SMIM11AP58511 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM11AP58511 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.16■□□□□ 0.82
SMIM11AP58511 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.16■□□□□ 0.82
SMIM11AP58511 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.16■□□□□ 0.82
SMIM11AP58511 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.16■□□□□ 0.82
SMIM11AP58511 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SMIM11AP58511 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM11AP58511 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM11AP58511 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM11AP58511 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM11AP58511 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMIM11AP58511 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM11AP58511 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM11AP58511 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM11AP58511 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SMIM11AP58511 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SMIM11AP58511 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.15■□□□□ 0.82
SMIM11AP58511 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM11AP58511 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM11AP58511 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SMIM11AP58511 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMIM11AP58511 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.14■□□□□ 0.82
SMIM11AP58511 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SMIM11AP58511 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM11AP58511 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.14■□□□□ 0.81
SMIM11AP58511 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM11AP58511 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM11AP58511 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM11AP58511 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SMIM11AP58511 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.14■□□□□ 0.81
SMIM11AP58511 AL031848.2-201ENST00000607670 837 ntBASIC20.14■□□□□ 0.81
SMIM11AP58511 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM11AP58511 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.14■□□□□ 0.81
SMIM11AP58511 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.13■□□□□ 0.81
SMIM11AP58511 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.13■□□□□ 0.81
SMIM11AP58511 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM11AP58511 KRT8P33-201ENST00000508125 1423 ntBASIC20.13■□□□□ 0.81
SMIM11AP58511 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.13■□□□□ 0.81
SMIM11AP58511 AC021242.3-201ENST00000607598 1377 ntBASIC20.13■□□□□ 0.81
SMIM11AP58511 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SMIM11AP58511 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.13■□□□□ 0.81
SMIM11AP58511 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.13■□□□□ 0.81
SMIM11AP58511 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM11AP58511 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM11AP58511 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.13■□□□□ 0.81
SMIM11AP58511 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM11AP58511 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.13■□□□□ 0.81
SMIM11AP58511 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM11AP58511 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.13■□□□□ 0.81
SMIM11AP58511 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM11AP58511 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SMIM11AP58511 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.12■□□□□ 0.81
SMIM11AP58511 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMIM11AP58511 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SMIM11AP58511 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM11AP58511 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM11AP58511 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM11AP58511 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.12■□□□□ 0.81
SMIM11AP58511 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM11AP58511 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM11AP58511 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SMIM11AP58511 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM11AP58511 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM11AP58511 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM11AP58511 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM11AP58511 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SMIM11AP58511 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
SMIM11AP58511 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.11■□□□□ 0.81
SMIM11AP58511 BX664725.1-201ENST00000438252 379 ntBASIC20.11■□□□□ 0.81
SMIM11AP58511 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SMIM11AP58511 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.11■□□□□ 0.81
SMIM11AP58511 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.11■□□□□ 0.81
SMIM11AP58511 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM11AP58511 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM11AP58511 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM11AP58511 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM11AP58511 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM11AP58511 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM11AP58511 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SMIM11AP58511 AL033527.3-201ENST00000566366 1196 ntBASIC20.1■□□□□ 0.81
SMIM11AP58511 CA15P2-201ENST00000611168 834 ntBASIC20.1■□□□□ 0.81
SMIM11AP58511 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM11AP58511 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.1■□□□□ 0.81
SMIM11AP58511 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.1■□□□□ 0.81
SMIM11AP58511 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM11AP58511 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.09■□□□□ 0.81
SMIM11AP58511 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.09■□□□□ 0.81
SMIM11AP58511 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM11AP58511 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM11AP58511 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SMIM11AP58511 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.08■□□□□ 0.81
SMIM11AP58511 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM11AP58511 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms