Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ESRRAP2-201ENST00000418437 1549 ntBASIC20.64■□□□□ 0.9
RAB38P57729 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RAB38P57729 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RAB38P57729 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB38P57729 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.64■□□□□ 0.89
RAB38P57729 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB38P57729 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB38P57729 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB38P57729 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB38P57729 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB38P57729 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB38P57729 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB38P57729 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB38P57729 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB38P57729 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAB38P57729 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB38P57729 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB38P57729 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RAB38P57729 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB38P57729 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.63■□□□□ 0.89
RAB38P57729 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RAB38P57729 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RAB38P57729 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB38P57729 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RAB38P57729 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB38P57729 AC087742.1-201ENST00000575880 1738 ntBASIC20.62■□□□□ 0.89
RAB38P57729 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB38P57729 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RAB38P57729 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.62■□□□□ 0.89
RAB38P57729 AC010141.3-201ENST00000456659 717 ntBASIC20.62■□□□□ 0.89
RAB38P57729 IGHV3-19-201ENST00000521488 291 ntBASIC20.62■□□□□ 0.89
RAB38P57729 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.62■□□□□ 0.89
RAB38P57729 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB38P57729 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB38P57729 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RAB38P57729 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB38P57729 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB38P57729 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB38P57729 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB38P57729 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB38P57729 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB38P57729 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB38P57729 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB38P57729 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB38P57729 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.61■□□□□ 0.89
RAB38P57729 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB38P57729 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RAB38P57729 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RAB38P57729 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RAB38P57729 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB38P57729 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB38P57729 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
RAB38P57729 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB38P57729 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB38P57729 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB38P57729 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB38P57729 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RAB38P57729 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RAB38P57729 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB38P57729 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB38P57729 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB38P57729 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
RAB38P57729 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB38P57729 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.59■□□□□ 0.89
RAB38P57729 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB38P57729 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RAB38P57729 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB38P57729 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAB38P57729 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB38P57729 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB38P57729 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.58■□□□□ 0.89
RAB38P57729 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RAB38P57729 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RAB38P57729 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB38P57729 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB38P57729 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB38P57729 TSPY26P-201ENST00000476365 1326 ntBASIC20.57■□□□□ 0.88
RAB38P57729 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB38P57729 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.57■□□□□ 0.88
RAB38P57729 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RAB38P57729 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB38P57729 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
RAB38P57729 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB38P57729 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB38P57729 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB38P57729 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB38P57729 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB38P57729 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAB38P57729 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB38P57729 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms