Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.89■□□□□ 0.77
SUMO3P55854 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SUMO3P55854 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.89■□□□□ 0.77
SUMO3P55854 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.88■□□□□ 0.77
SUMO3P55854 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUMO3P55854 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SUMO3P55854 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.88■□□□□ 0.77
SUMO3P55854 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.88■□□□□ 0.77
SUMO3P55854 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUMO3P55854 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SUMO3P55854 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SUMO3P55854 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SUMO3P55854 AC010141.3-201ENST00000456659 717 ntBASIC19.88■□□□□ 0.77
SUMO3P55854 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.88■□□□□ 0.77
SUMO3P55854 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SUMO3P55854 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUMO3P55854 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SUMO3P55854 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUMO3P55854 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.88■□□□□ 0.77
SUMO3P55854 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SUMO3P55854 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SUMO3P55854 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUMO3P55854 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUMO3P55854 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.87■□□□□ 0.77
SUMO3P55854 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SUMO3P55854 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUMO3P55854 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SUMO3P55854 AP001330.3-201ENST00000520123 633 ntBASIC19.87■□□□□ 0.77
SUMO3P55854 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.87■□□□□ 0.77
SUMO3P55854 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.87■□□□□ 0.77
SUMO3P55854 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SUMO3P55854 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SUMO3P55854 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.87■□□□□ 0.77
SUMO3P55854 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
SUMO3P55854 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SUMO3P55854 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SUMO3P55854 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SUMO3P55854 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.86■□□□□ 0.77
SUMO3P55854 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.86■□□□□ 0.77
SUMO3P55854 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SUMO3P55854 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SUMO3P55854 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.86■□□□□ 0.77
SUMO3P55854 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUMO3P55854 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUMO3P55854 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUMO3P55854 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUMO3P55854 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SUMO3P55854 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.85■□□□□ 0.77
SUMO3P55854 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.85■□□□□ 0.77
SUMO3P55854 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SUMO3P55854 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.85■□□□□ 0.77
SUMO3P55854 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUMO3P55854 AC233723.2-201ENST00000623798 2106 ntBASIC19.85■□□□□ 0.77
SUMO3P55854 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SUMO3P55854 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUMO3P55854 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SUMO3P55854 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SUMO3P55854 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.84■□□□□ 0.77
SUMO3P55854 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 MIR939-201ENST00000401314 82 ntBASIC19.84■□□□□ 0.77
SUMO3P55854 AC091305.1-201ENST00000479476 895 ntBASIC19.84■□□□□ 0.77
SUMO3P55854 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.84■□□□□ 0.77
SUMO3P55854 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
SUMO3P55854 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SUMO3P55854 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SUMO3P55854 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SUMO3P55854 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SUMO3P55854 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SUMO3P55854 AC126544.1-201ENST00000580842 1059 ntBASIC19.83■□□□□ 0.77
SUMO3P55854 AL031432.3-201ENST00000607698 485 ntBASIC19.83■□□□□ 0.77
SUMO3P55854 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SUMO3P55854 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SUMO3P55854 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
SUMO3P55854 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SUMO3P55854 RASA4CP-201ENST00000424092 1398 ntBASIC19.83■□□□□ 0.76
SUMO3P55854 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
SUMO3P55854 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUMO3P55854 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SUMO3P55854 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SUMO3P55854 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.82■□□□□ 0.76
SUMO3P55854 AC099791.1-201ENST00000416440 715 ntBASIC19.82■□□□□ 0.76
SUMO3P55854 AC079089.2-201ENST00000531211 1277 ntBASIC19.82■□□□□ 0.76
SUMO3P55854 AF213884.3-201ENST00000563833 479 ntBASIC19.82■□□□□ 0.76
SUMO3P55854 AC008764.7-201ENST00000593779 1081 ntBASIC19.82■□□□□ 0.76
SUMO3P55854 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms