Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
PDX1P52945 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.29■■□□□ 1
PDX1P52945 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.29■■□□□ 1
PDX1P52945 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.29■■□□□ 1
PDX1P52945 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.29■■□□□ 1
PDX1P52945 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.29■■□□□ 1
PDX1P52945 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.29■■□□□ 1
PDX1P52945 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.29■■□□□ 1
PDX1P52945 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDX1P52945 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDX1P52945 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDX1P52945 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.28■■□□□ 1
PDX1P52945 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.28■■□□□ 1
PDX1P52945 AC105233.4-201ENST00000642045 216 ntBASIC21.28■■□□□ 1
PDX1P52945 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PDX1P52945 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDX1P52945 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDX1P52945 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.28■■□□□ 1
PDX1P52945 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
PDX1P52945 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDX1P52945 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.27■■□□□ 1
PDX1P52945 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.27■■□□□ 1
PDX1P52945 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.27■■□□□ 1
PDX1P52945 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.27■■□□□ 1
PDX1P52945 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.27■■□□□ 1
PDX1P52945 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDX1P52945 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.27■□□□□ 0.99
PDX1P52945 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDX1P52945 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
PDX1P52945 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.26■□□□□ 0.99
PDX1P52945 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.26■□□□□ 0.99
PDX1P52945 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDX1P52945 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDX1P52945 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDX1P52945 ID1-201ENST00000376105 1233 ntBASIC21.25■□□□□ 0.99
PDX1P52945 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.25■□□□□ 0.99
PDX1P52945 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PDX1P52945 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PDX1P52945 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDX1P52945 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDX1P52945 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDX1P52945 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDX1P52945 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PDX1P52945 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.24■□□□□ 0.99
PDX1P52945 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDX1P52945 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.24■□□□□ 0.99
PDX1P52945 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.24■□□□□ 0.99
PDX1P52945 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.24■□□□□ 0.99
PDX1P52945 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDX1P52945 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PDX1P52945 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDX1P52945 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDX1P52945 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDX1P52945 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.23■□□□□ 0.99
PDX1P52945 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.23■□□□□ 0.99
PDX1P52945 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.23■□□□□ 0.99
PDX1P52945 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDX1P52945 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.23■□□□□ 0.99
PDX1P52945 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDX1P52945 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PDX1P52945 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.23■□□□□ 0.99
PDX1P52945 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDX1P52945 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDX1P52945 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDX1P52945 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDX1P52945 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDX1P52945 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDX1P52945 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms