Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SftpbP50405 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SftpbP50405 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SftpbP50405 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SftpbP50405 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
SftpbP50405 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SftpbP50405 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SftpbP50405 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.84■□□□□ 0.77
SftpbP50405 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.84■□□□□ 0.77
SftpbP50405 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SftpbP50405 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.84■□□□□ 0.77
SftpbP50405 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SftpbP50405 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SftpbP50405 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SftpbP50405 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SftpbP50405 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SftpbP50405 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.83■□□□□ 0.77
SftpbP50405 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.83■□□□□ 0.77
SftpbP50405 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SftpbP50405 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
SftpbP50405 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.76
SftpbP50405 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SftpbP50405 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SftpbP50405 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.82■□□□□ 0.76
SftpbP50405 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SftpbP50405 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.81■□□□□ 0.76
SftpbP50405 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SftpbP50405 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SftpbP50405 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.81■□□□□ 0.76
SftpbP50405 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SftpbP50405 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SftpbP50405 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SftpbP50405 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SftpbP50405 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SftpbP50405 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.8■□□□□ 0.76
SftpbP50405 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SftpbP50405 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SftpbP50405 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SftpbP50405 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SftpbP50405 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.8■□□□□ 0.76
SftpbP50405 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SftpbP50405 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.8■□□□□ 0.76
SftpbP50405 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SftpbP50405 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SftpbP50405 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SftpbP50405 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SftpbP50405 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SftpbP50405 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SftpbP50405 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
SftpbP50405 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SftpbP50405 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SftpbP50405 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.79■□□□□ 0.76
SftpbP50405 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.79■□□□□ 0.76
SftpbP50405 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SftpbP50405 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SftpbP50405 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SftpbP50405 Golph3-205ENSMUST00000228671 2842 ntBASIC19.79■□□□□ 0.76
SftpbP50405 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SftpbP50405 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SftpbP50405 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SftpbP50405 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SftpbP50405 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.78■□□□□ 0.76
SftpbP50405 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SftpbP50405 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SftpbP50405 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SftpbP50405 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.77■□□□□ 0.76
SftpbP50405 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SftpbP50405 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SftpbP50405 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SftpbP50405 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SftpbP50405 Gm14117-201ENSMUST00000122417 843 ntBASIC19.77■□□□□ 0.76
SftpbP50405 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SftpbP50405 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms