Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RFC5P40937 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.26■■□□□ 1.47
RFC5P40937 AC105233.4-201ENST00000642045 216 ntBASIC24.26■■□□□ 1.47
RFC5P40937 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RFC5P40937 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
RFC5P40937 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.26■■□□□ 1.47
RFC5P40937 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
RFC5P40937 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RFC5P40937 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.25■■□□□ 1.47
RFC5P40937 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.25■■□□□ 1.47
RFC5P40937 AC027612.3-201ENST00000413684 1047 ntBASIC24.25■■□□□ 1.47
RFC5P40937 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.25■■□□□ 1.47
RFC5P40937 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.25■■□□□ 1.47
RFC5P40937 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RFC5P40937 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.24■■□□□ 1.47
RFC5P40937 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RFC5P40937 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RFC5P40937 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RFC5P40937 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.24■■□□□ 1.47
RFC5P40937 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.24■■□□□ 1.47
RFC5P40937 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
RFC5P40937 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.24■■□□□ 1.47
RFC5P40937 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.24■■□□□ 1.47
RFC5P40937 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.24■■□□□ 1.47
RFC5P40937 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RFC5P40937 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RFC5P40937 YBX1P1-201ENST00000445822 960 ntBASIC24.23■■□□□ 1.47
RFC5P40937 OXCT2P1-201ENST00000447263 1535 ntBASIC24.23■■□□□ 1.47
RFC5P40937 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.23■■□□□ 1.47
RFC5P40937 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.22■■□□□ 1.47
RFC5P40937 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RFC5P40937 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RFC5P40937 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RFC5P40937 LINC01960-201ENST00000563759 1884 ntBASIC24.22■■□□□ 1.47
RFC5P40937 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RFC5P40937 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RFC5P40937 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.22■■□□□ 1.47
RFC5P40937 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.22■■□□□ 1.47
RFC5P40937 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.22■■□□□ 1.47
RFC5P40937 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RFC5P40937 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.22■■□□□ 1.47
RFC5P40937 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RFC5P40937 MIR5787-201ENST00000611784 55 ntBASIC24.22■■□□□ 1.47
RFC5P40937 MIR6084-201ENST00000622012 110 ntBASIC24.22■■□□□ 1.47
RFC5P40937 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RFC5P40937 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RFC5P40937 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.21■■□□□ 1.47
RFC5P40937 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RFC5P40937 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.21■■□□□ 1.47
RFC5P40937 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.21■■□□□ 1.47
RFC5P40937 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.21■■□□□ 1.47
RFC5P40937 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
RFC5P40937 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RFC5P40937 DUSP8P5-201ENST00000422884 1815 ntBASIC24.21■■□□□ 1.47
RFC5P40937 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RFC5P40937 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.21■■□□□ 1.47
RFC5P40937 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.2■■□□□ 1.47
RFC5P40937 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RFC5P40937 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RFC5P40937 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RFC5P40937 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.2■■□□□ 1.46
RFC5P40937 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RFC5P40937 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.2■■□□□ 1.46
RFC5P40937 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.2■■□□□ 1.46
RFC5P40937 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFC5P40937 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.19■■□□□ 1.46
RFC5P40937 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFC5P40937 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.19■■□□□ 1.46
RFC5P40937 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFC5P40937 AC123595.1-201ENST00000440769 1046 ntBASIC24.19■■□□□ 1.46
RFC5P40937 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.19■■□□□ 1.46
RFC5P40937 AC087623.3-201ENST00000607047 1098 ntBASIC24.19■■□□□ 1.46
RFC5P40937 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RFC5P40937 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.19■■□□□ 1.46
RFC5P40937 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.19■■□□□ 1.46
RFC5P40937 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFC5P40937 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RFC5P40937 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RFC5P40937 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RFC5P40937 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RFC5P40937 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.18■■□□□ 1.46
RFC5P40937 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.18■■□□□ 1.46
RFC5P40937 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.18■■□□□ 1.46
RFC5P40937 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RFC5P40937 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.18■■□□□ 1.46
RFC5P40937 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RFC5P40937 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RFC5P40937 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RFC5P40937 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RFC5P40937 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.17■■□□□ 1.46
RFC5P40937 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.17■■□□□ 1.46
RFC5P40937 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
RFC5P40937 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RFC5P40937 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RFC5P40937 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RFC5P40937 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.17■■□□□ 1.46
RFC5P40937 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RFC5P40937 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.17■■□□□ 1.46
RFC5P40937 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.17■■□□□ 1.46
RFC5P40937 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms