Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 YRM1YOR172W 2361 nt3.65□□□□□ -1.83
LDB7P38210 YDL071CYDL071C 375 nt3.65□□□□□ -1.83
LDB7P38210 COS7YDL248W 1152 nt3.65□□□□□ -1.83
LDB7P38210 SUP56tL(CAA)A 82 nt3.65□□□□□ -1.83
LDB7P38210 SUP53tL(CAA)C 82 nt3.65□□□□□ -1.83
LDB7P38210 tL(CAA)DtL(CAA)D 82 nt3.65□□□□□ -1.83
LDB7P38210 tL(CAA)G1tL(CAA)G1 82 nt3.65□□□□□ -1.83
LDB7P38210 SUP54tL(CAA)G2 82 nt3.65□□□□□ -1.83
LDB7P38210 tL(CAA)G3tL(CAA)G3 82 nt3.65□□□□□ -1.83
LDB7P38210 tL(CAA)KtL(CAA)K 82 nt3.65□□□□□ -1.83
LDB7P38210 tL(CAA)LtL(CAA)L 82 nt3.65□□□□□ -1.83
LDB7P38210 tL(CAA)MtL(CAA)M 82 nt3.65□□□□□ -1.83
LDB7P38210 tL(CAA)NtL(CAA)N 82 nt3.65□□□□□ -1.83
LDB7P38210 YHB1YGR234W 1200 nt3.65□□□□□ -1.83
LDB7P38210 YIL152WYIL152W 708 nt3.65□□□□□ -1.83
LDB7P38210 COS5YJR161C 1152 nt3.65□□□□□ -1.83
LDB7P38210 YLR154W-BYLR154W-B 165 nt3.65□□□□□ -1.83
LDB7P38210 PRX1YBL064C 786 nt3.65□□□□□ -1.83
LDB7P38210 YOL079WYOL079W 399 nt3.65□□□□□ -1.83
LDB7P38210 CDC45YLR103C 1953 nt3.65□□□□□ -1.83
LDB7P38210 PEP7YDR323C 1548 nt3.65□□□□□ -1.83
LDB7P38210 SPS2YDR522C 1509 nt3.65□□□□□ -1.83
LDB7P38210 KIP3YGL216W 2418 nt3.64□□□□□ -1.83
LDB7P38210 RDS1YCR106W 2499 nt3.64□□□□□ -1.83
LDB7P38210 MRS3YJL133W 945 nt3.64□□□□□ -1.83
LDB7P38210 HMX1YLR205C 954 nt3.64□□□□□ -1.83
LDB7P38210 PFA4YOL003C 1137 nt3.64□□□□□ -1.83
LDB7P38210 CDC14YFR028C 1656 nt3.64□□□□□ -1.83
LDB7P38210 PCL10YGL134W 1302 nt3.64□□□□□ -1.83
LDB7P38210 APL4YPR029C 2499 nt3.63□□□□□ -1.83
LDB7P38210 YCL075WYCL075W 441 nt3.63□□□□□ -1.83
LDB7P38210 ERV14YGL054C 417 nt3.63□□□□□ -1.83
LDB7P38210 YHI9YHR029C 885 nt3.63□□□□□ -1.83
LDB7P38210 RSM25YIL093C 795 nt3.63□□□□□ -1.83
LDB7P38210 SGN1YIR001C 753 nt3.63□□□□□ -1.83
LDB7P38210 PEX12YMR026C 1200 nt3.63□□□□□ -1.83
LDB7P38210 RPL18AYOL120C 561 nt3.63□□□□□ -1.83
LDB7P38210 GLO4YOR040W 858 nt3.63□□□□□ -1.83
LDB7P38210 YBR255C-AYBR255C-A 363 nt3.63□□□□□ -1.83
LDB7P38210 SMP3YOR149C 1551 nt3.63□□□□□ -1.83
LDB7P38210 PUB1YNL016W 1362 nt3.63□□□□□ -1.83
LDB7P38210 TAF7YMR227C 1773 nt3.62□□□□□ -1.83
LDB7P38210 AAD3YCR107W 1092 nt3.62□□□□□ -1.83
LDB7P38210 FMP10YER182W 735 nt3.62□□□□□ -1.83
LDB7P38210 HIS6YIL020C 786 nt3.62□□□□□ -1.83
LDB7P38210 CDC8YJR057W 651 nt3.62□□□□□ -1.83
LDB7P38210 YLR156WYLR156W 345 nt3.62□□□□□ -1.83
LDB7P38210 YLR159WYLR159W 345 nt3.62□□□□□ -1.83
LDB7P38210 YLR161WYLR161W 345 nt3.62□□□□□ -1.83
LDB7P38210 ARG80YMR042W 534 nt3.62□□□□□ -1.83
LDB7P38210 ECM16YMR128W 3804 nt3.62□□□□□ -1.83
LDB7P38210 SLA1YBL007C 3735 nt3.61□□□□□ -1.83
LDB7P38210 MRP13YGR084C 1020 nt3.61□□□□□ -1.83
LDB7P38210 CSM2YIL132C 642 nt3.61□□□□□ -1.83
LDB7P38210 CTR86YCR054C 1692 nt3.61□□□□□ -1.83
LDB7P38210 MNR2YKL064W 2910 nt3.6□□□□□ -1.83
LDB7P38210 SWH1YAR042W 3567 nt3.6□□□□□ -1.83
LDB7P38210 SPT23YKL020C 3249 nt3.6□□□□□ -1.83
LDB7P38210 ECM8YBR076W 1065 nt3.6□□□□□ -1.83
LDB7P38210 PRE2YPR103W 864 nt3.6□□□□□ -1.83
LDB7P38210 SPT10YJL127C 1923 nt3.6□□□□□ -1.83
LDB7P38210 TAF6YGL112C 1551 nt3.59□□□□□ -1.83
LDB7P38210 HPR1YDR138W 2259 nt3.59□□□□□ -1.83
LDB7P38210 TRX3YCR083W 384 nt3.59□□□□□ -1.83
LDB7P38210 FOL2YGR267C 732 nt3.59□□□□□ -1.83
LDB7P38210 DAN1YJR150C 897 nt3.59□□□□□ -1.83
LDB7P38210 HTA2YBL003C 399 nt3.59□□□□□ -1.83
LDB7P38210 EMC1YCL045C 2283 nt3.59□□□□□ -1.84
LDB7P38210 DBP3YGL078C 1572 nt3.59□□□□□ -1.84
LDB7P38210 RPO21YDL140C 5202 nt3.58□□□□□ -1.84
LDB7P38210 KRE5YOR336W 4098 nt3.58□□□□□ -1.84
LDB7P38210 BUD6YLR319C 2367 nt3.58□□□□□ -1.84
LDB7P38210 RPS13YDR064W 456 nt3.58□□□□□ -1.84
LDB7P38210 YDR282CYDR282C 1245 nt3.58□□□□□ -1.84
LDB7P38210 COX2Q0250 756 nt3.58□□□□□ -1.84
LDB7P38210 YJR112W-AYJR112W-A 330 nt3.58□□□□□ -1.84
LDB7P38210 YBR141W-AYBR141W-A 96 nt3.58□□□□□ -1.84
LDB7P38210 MRH4YGL064C 1686 nt3.58□□□□□ -1.84
LDB7P38210 ATG26YLR189C 3597 nt3.58□□□□□ -1.84
LDB7P38210 MSD1YPL104W 1977 nt3.58□□□□□ -1.84
LDB7P38210 FBP26YJL155C 1359 nt3.57□□□□□ -1.84
LDB7P38210 TMA19YKL056C 504 nt3.57□□□□□ -1.84
LDB7P38210 RIB4YOL143C 510 nt3.57□□□□□ -1.84
LDB7P38210 DER1YBR201W 636 nt3.57□□□□□ -1.84
LDB7P38210 FKH2YNL068C 2589 nt3.57□□□□□ -1.84
LDB7P38210 APE2YKL157W 2859 nt3.56□□□□□ -1.84
LDB7P38210 RRN6YBL014C 2685 nt3.56□□□□□ -1.84
LDB7P38210 FAD1YDL045C 921 nt3.56□□□□□ -1.84
LDB7P38210 SEC53YFL045C 765 nt3.56□□□□□ -1.84
LDB7P38210 RTA1YGR213C 954 nt3.56□□□□□ -1.84
LDB7P38210 FMC1YIL098C 468 nt3.56□□□□□ -1.84
LDB7P38210 MRT4YKL009W 711 nt3.56□□□□□ -1.84
LDB7P38210 ADD66YKL206C 804 nt3.56□□□□□ -1.84
LDB7P38210 VPS53YJL029C 2469 nt3.56□□□□□ -1.84
LDB7P38210 RTK1YDL025C 1863 nt3.56□□□□□ -1.84
LDB7P38210 MUP3YHL036W 1641 nt3.55□□□□□ -1.84
LDB7P38210 ERB1YMR049C 2424 nt3.55□□□□□ -1.84
LDB7P38210 UBX5YDR330W 1503 nt3.55□□□□□ -1.84
LDB7P38210 TYR1YBR166C 1359 nt3.55□□□□□ -1.84
LDB7P38210 TRS120YDR407C 3870 nt3.55□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms