Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 DUX4L4-201ENST00000566884 1269 ntBASIC20.32■□□□□ 0.84
TNFRSF1BP20333 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TNFRSF1BP20333 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFRSF1BP20333 AC010542.4-201ENST00000563151 1910 ntBASIC20.31■□□□□ 0.84
TNFRSF1BP20333 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.31■□□□□ 0.84
TNFRSF1BP20333 AC009102.2-201ENST00000606772 1639 ntBASIC20.31■□□□□ 0.84
TNFRSF1BP20333 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 FAM99A-202ENST00000538190 1989 ntBASIC20.3■□□□□ 0.84
TNFRSF1BP20333 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 AC009086.3-201ENST00000623486 1008 ntBASIC20.3■□□□□ 0.84
TNFRSF1BP20333 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TNFRSF1BP20333 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 AC026310.3-201ENST00000625186 2373 ntBASIC20.29■□□□□ 0.84
TNFRSF1BP20333 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 AC092028.1-203ENST00000608262 953 ntBASIC20.29■□□□□ 0.84
TNFRSF1BP20333 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFRSF1BP20333 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFRSF1BP20333 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFRSF1BP20333 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF1BP20333 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF1BP20333 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.26■□□□□ 0.83
TNFRSF1BP20333 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TNFRSF1BP20333 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
TNFRSF1BP20333 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFRSF1BP20333 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.26■□□□□ 0.83
TNFRSF1BP20333 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms