Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GKN3PP0CG01 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.16■□□□□ 0.82
GKN3PP0CG01 AC099791.2-201ENST00000605725 427 ntBASIC20.16■□□□□ 0.82
GKN3PP0CG01 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.16■□□□□ 0.82
GKN3PP0CG01 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.16■□□□□ 0.82
GKN3PP0CG01 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GKN3PP0CG01 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GKN3PP0CG01 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
GKN3PP0CG01 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GKN3PP0CG01 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.16■□□□□ 0.82
GKN3PP0CG01 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GKN3PP0CG01 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GKN3PP0CG01 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
GKN3PP0CG01 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GKN3PP0CG01 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GKN3PP0CG01 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.15■□□□□ 0.82
GKN3PP0CG01 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GKN3PP0CG01 AL499627.2-201ENST00000606283 725 ntBASIC20.15■□□□□ 0.82
GKN3PP0CG01 AC241377.3-202ENST00000626088 1088 ntBASIC20.15■□□□□ 0.82
GKN3PP0CG01 AC241585.3-202ENST00000628937 1088 ntBASIC20.15■□□□□ 0.82
GKN3PP0CG01 AC245100.8-202ENST00000629247 1058 ntBASIC20.15■□□□□ 0.82
GKN3PP0CG01 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
GKN3PP0CG01 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
GKN3PP0CG01 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GKN3PP0CG01 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GKN3PP0CG01 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.15■□□□□ 0.82
GKN3PP0CG01 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GKN3PP0CG01 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GKN3PP0CG01 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.82
GKN3PP0CG01 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GKN3PP0CG01 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GKN3PP0CG01 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
GKN3PP0CG01 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GKN3PP0CG01 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GKN3PP0CG01 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.14■□□□□ 0.81
GKN3PP0CG01 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.14■□□□□ 0.81
GKN3PP0CG01 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
GKN3PP0CG01 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.14■□□□□ 0.81
GKN3PP0CG01 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.14■□□□□ 0.81
GKN3PP0CG01 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GKN3PP0CG01 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GKN3PP0CG01 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GKN3PP0CG01 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.13■□□□□ 0.81
GKN3PP0CG01 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
GKN3PP0CG01 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GKN3PP0CG01 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
GKN3PP0CG01 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.13■□□□□ 0.81
GKN3PP0CG01 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
GKN3PP0CG01 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GKN3PP0CG01 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GKN3PP0CG01 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GKN3PP0CG01 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
GKN3PP0CG01 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
GKN3PP0CG01 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 pRNA.6-201ENST00000610482 90 ntBASIC20.12■□□□□ 0.81
GKN3PP0CG01 pRNA.5-201ENST00000612139 90 ntBASIC20.12■□□□□ 0.81
GKN3PP0CG01 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.12■□□□□ 0.81
GKN3PP0CG01 pRNA.11-201ENST00000618423 90 ntBASIC20.12■□□□□ 0.81
GKN3PP0CG01 pRNA.13-201ENST00000619112 90 ntBASIC20.12■□□□□ 0.81
GKN3PP0CG01 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GKN3PP0CG01 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.12■□□□□ 0.81
GKN3PP0CG01 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.12■□□□□ 0.81
GKN3PP0CG01 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
GKN3PP0CG01 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.11■□□□□ 0.81
GKN3PP0CG01 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.11■□□□□ 0.81
GKN3PP0CG01 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.11■□□□□ 0.81
GKN3PP0CG01 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.11■□□□□ 0.81
GKN3PP0CG01 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.11■□□□□ 0.81
GKN3PP0CG01 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.11■□□□□ 0.81
GKN3PP0CG01 AL512631.2-201ENST00000604634 923 ntBASIC20.11■□□□□ 0.81
GKN3PP0CG01 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
GKN3PP0CG01 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GKN3PP0CG01 AC092053.2-201ENST00000640557 1818 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms