Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.8■□□□□ 0.76
HMGN1P05114 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 AC103834.1-201ENST00000520383 144 ntBASIC19.8■□□□□ 0.76
HMGN1P05114 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGN1P05114 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGN1P05114 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HMGN1P05114 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGN1P05114 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HMGN1P05114 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGN1P05114 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGN1P05114 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGN1P05114 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGN1P05114 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGN1P05114 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGN1P05114 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGN1P05114 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGN1P05114 AC103724.3-201ENST00000564481 992 ntBASIC19.79■□□□□ 0.76
HMGN1P05114 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HMGN1P05114 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGN1P05114 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGN1P05114 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGN1P05114 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGN1P05114 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
HMGN1P05114 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGN1P05114 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGN1P05114 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGN1P05114 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HMGN1P05114 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGN1P05114 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGN1P05114 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.77■□□□□ 0.76
HMGN1P05114 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGN1P05114 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGN1P05114 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGN1P05114 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGN1P05114 AL137060.1-201ENST00000618151 2648 ntBASIC19.77■□□□□ 0.76
HMGN1P05114 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGN1P05114 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGN1P05114 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HMGN1P05114 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.76■□□□□ 0.75
HMGN1P05114 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGN1P05114 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGN1P05114 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGN1P05114 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HMGN1P05114 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGN1P05114 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGN1P05114 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HMGN1P05114 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGN1P05114 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGN1P05114 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
HMGN1P05114 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGN1P05114 AC012354.3-201ENST00000623734 483 ntBASIC19.75■□□□□ 0.75
HMGN1P05114 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.75■□□□□ 0.75
HMGN1P05114 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGN1P05114 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HMGN1P05114 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGN1P05114 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.75■□□□□ 0.75
HMGN1P05114 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGN1P05114 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HMGN1P05114 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HMGN1P05114 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGN1P05114 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HMGN1P05114 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HMGN1P05114 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.74■□□□□ 0.75
HMGN1P05114 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HMGN1P05114 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.74■□□□□ 0.75
HMGN1P05114 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.74■□□□□ 0.75
HMGN1P05114 KRT8P33-201ENST00000508125 1423 ntBASIC19.74■□□□□ 0.75
HMGN1P05114 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.74■□□□□ 0.75
HMGN1P05114 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HMGN1P05114 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGN1P05114 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HMGN1P05114 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.73■□□□□ 0.75
HMGN1P05114 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGN1P05114 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HMGN1P05114 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HMGN1P05114 AL031848.2-201ENST00000607670 837 ntBASIC19.73■□□□□ 0.75
HMGN1P05114 CA15P2-201ENST00000611168 834 ntBASIC19.73■□□□□ 0.75
HMGN1P05114 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms