Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
P04436 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.02■□□□□ 0.8
P04436 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04436 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04436 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04436 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.02■□□□□ 0.8
P04436 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.02■□□□□ 0.8
P04436 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.02■□□□□ 0.8
P04436 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
P04436 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
P04436 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.02■□□□□ 0.79
P04436 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
P04436 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
P04436 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
P04436 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.01■□□□□ 0.79
P04436 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.01■□□□□ 0.79
P04436 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04436 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.01■□□□□ 0.79
P04436 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04436 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04436 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04436 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.01■□□□□ 0.79
P04436 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.01■□□□□ 0.79
P04436 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.01■□□□□ 0.79
P04436 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.01■□□□□ 0.79
P04436 MIR6084-201ENST00000622012 110 ntBASIC20.01■□□□□ 0.79
P04436 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04436 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
P04436 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
P04436 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.01■□□□□ 0.79
P04436 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P04436 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P04436 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.01■□□□□ 0.79
P04436 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.01■□□□□ 0.79
P04436 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.01■□□□□ 0.79
P04436 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
P04436 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P04436 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
P04436 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
P04436 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20■□□□□ 0.79
P04436 YBX1P1-201ENST00000445822 960 ntBASIC20■□□□□ 0.79
P04436 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20■□□□□ 0.79
P04436 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20■□□□□ 0.79
P04436 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20■□□□□ 0.79
P04436 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20■□□□□ 0.79
P04436 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P04436 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
P04436 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P04436 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
P04436 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P04436 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
P04436 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.99■□□□□ 0.79
P04436 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.99■□□□□ 0.79
P04436 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.99■□□□□ 0.79
P04436 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P04436 AC027612.3-201ENST00000413684 1047 ntBASIC19.99■□□□□ 0.79
P04436 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
P04436 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
P04436 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.99■□□□□ 0.79
P04436 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P04436 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P04436 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
P04436 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.98■□□□□ 0.79
P04436 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04436 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04436 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04436 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04436 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.98■□□□□ 0.79
P04436 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.98■□□□□ 0.79
P04436 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
P04436 AC087623.3-201ENST00000607047 1098 ntBASIC19.98■□□□□ 0.79
P04436 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
P04436 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04436 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
P04436 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.98■□□□□ 0.79
P04436 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
P04436 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P04436 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.97■□□□□ 0.79
P04436 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P04436 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
P04436 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P04436 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.97■□□□□ 0.79
P04436 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
P04436 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P04436 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.97■□□□□ 0.79
P04436 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P04436 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P04436 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.97■□□□□ 0.79
P04436 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.97■□□□□ 0.79
P04436 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.97■□□□□ 0.79
P04436 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P04436 OXCT2P1-201ENST00000447263 1535 ntBASIC19.97■□□□□ 0.79
P04436 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.96■□□□□ 0.79
P04436 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04436 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms