Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
MBD4O95243 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
MBD4O95243 LINC01960-201ENST00000563759 1884 ntBASIC26.24■■□□□ 1.79
MBD4O95243 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MBD4O95243 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MBD4O95243 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.24■■□□□ 1.79
MBD4O95243 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.24■■□□□ 1.79
MBD4O95243 AC010141.3-201ENST00000456659 717 ntBASIC26.24■■□□□ 1.79
MBD4O95243 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.24■■□□□ 1.79
MBD4O95243 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
MBD4O95243 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.24■■□□□ 1.79
MBD4O95243 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
MBD4O95243 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
MBD4O95243 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MBD4O95243 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MBD4O95243 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.23■■□□□ 1.79
MBD4O95243 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MBD4O95243 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.23■■□□□ 1.79
MBD4O95243 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
MBD4O95243 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.23■■□□□ 1.79
MBD4O95243 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
MBD4O95243 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
MBD4O95243 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.23■■□□□ 1.79
MBD4O95243 AC012414.1-201ENST00000556676 535 ntBASIC26.23■■□□□ 1.79
MBD4O95243 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.23■■□□□ 1.79
MBD4O95243 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
MBD4O95243 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.23■■□□□ 1.79
MBD4O95243 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
MBD4O95243 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
MBD4O95243 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.22■■□□□ 1.79
MBD4O95243 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.22■■□□□ 1.79
MBD4O95243 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.22■■□□□ 1.79
MBD4O95243 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
MBD4O95243 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.22■■□□□ 1.79
MBD4O95243 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
MBD4O95243 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MBD4O95243 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
MBD4O95243 AC087239.1-201ENST00000622671 572 ntBASIC26.21■■□□□ 1.79
MBD4O95243 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
MBD4O95243 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.2■■□□□ 1.79
MBD4O95243 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
MBD4O95243 C9orf163-202ENST00000624034 2573 ntBASIC26.2■■□□□ 1.79
MBD4O95243 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.2■■□□□ 1.78
MBD4O95243 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
MBD4O95243 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.2■■□□□ 1.78
MBD4O95243 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
MBD4O95243 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.2■■□□□ 1.78
MBD4O95243 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
MBD4O95243 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
MBD4O95243 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
MBD4O95243 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.2■■□□□ 1.78
MBD4O95243 AL358852.1-201ENST00000623174 1268 ntBASIC26.2■■□□□ 1.78
MBD4O95243 AC105233.4-201ENST00000642045 216 ntBASIC26.2■■□□□ 1.78
MBD4O95243 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.19■■□□□ 1.78
MBD4O95243 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MBD4O95243 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.19■■□□□ 1.78
MBD4O95243 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MBD4O95243 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MBD4O95243 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MBD4O95243 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.19■■□□□ 1.78
MBD4O95243 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.19■■□□□ 1.78
MBD4O95243 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.19■■□□□ 1.78
MBD4O95243 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
MBD4O95243 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
MBD4O95243 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
MBD4O95243 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
MBD4O95243 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.18■■□□□ 1.78
MBD4O95243 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MBD4O95243 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MBD4O95243 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MBD4O95243 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MBD4O95243 AL354811.1-201ENST00000610286 706 ntBASIC26.18■■□□□ 1.78
MBD4O95243 MIR6821-201ENST00000617625 74 ntBASIC26.18■■□□□ 1.78
MBD4O95243 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
MBD4O95243 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
MBD4O95243 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
MBD4O95243 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
MBD4O95243 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
MBD4O95243 AC097381.1-201ENST00000429019 1296 ntBASIC26.17■■□□□ 1.78
MBD4O95243 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.17■■□□□ 1.78
MBD4O95243 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.17■■□□□ 1.78
MBD4O95243 AC087623.3-201ENST00000607047 1098 ntBASIC26.17■■□□□ 1.78
MBD4O95243 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
MBD4O95243 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.17■■□□□ 1.78
MBD4O95243 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
MBD4O95243 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
MBD4O95243 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
MBD4O95243 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
MBD4O95243 OXCT2P1-201ENST00000447263 1535 ntBASIC26.16■■□□□ 1.78
MBD4O95243 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
MBD4O95243 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms