Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.59■■□□□ 1.21
TSPAN3O60637 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.59■■□□□ 1.21
TSPAN3O60637 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TSPAN3O60637 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.59■■□□□ 1.21
TSPAN3O60637 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.59■■□□□ 1.21
TSPAN3O60637 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.59■■□□□ 1.21
TSPAN3O60637 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.59■■□□□ 1.21
TSPAN3O60637 AL031602.1-201ENST00000633169 911 ntBASIC22.59■■□□□ 1.21
TSPAN3O60637 AC105233.4-201ENST00000642045 216 ntBASIC22.59■■□□□ 1.21
TSPAN3O60637 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TSPAN3O60637 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TSPAN3O60637 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TSPAN3O60637 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TSPAN3O60637 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.59■■□□□ 1.21
TSPAN3O60637 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TSPAN3O60637 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.58■■□□□ 1.21
TSPAN3O60637 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.58■■□□□ 1.21
TSPAN3O60637 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.58■■□□□ 1.21
TSPAN3O60637 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.58■■□□□ 1.21
TSPAN3O60637 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.58■■□□□ 1.21
TSPAN3O60637 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TSPAN3O60637 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.58■■□□□ 1.21
TSPAN3O60637 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.58■■□□□ 1.21
TSPAN3O60637 AL358852.1-201ENST00000623174 1268 ntBASIC22.58■■□□□ 1.21
TSPAN3O60637 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TSPAN3O60637 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.58■■□□□ 1.2
TSPAN3O60637 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.58■■□□□ 1.2
TSPAN3O60637 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TSPAN3O60637 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TSPAN3O60637 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TSPAN3O60637 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.57■■□□□ 1.2
TSPAN3O60637 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TSPAN3O60637 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TSPAN3O60637 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TSPAN3O60637 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
TSPAN3O60637 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
TSPAN3O60637 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TSPAN3O60637 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.56■■□□□ 1.2
TSPAN3O60637 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.56■■□□□ 1.2
TSPAN3O60637 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.56■■□□□ 1.2
TSPAN3O60637 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TSPAN3O60637 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.56■■□□□ 1.2
TSPAN3O60637 AC010141.3-201ENST00000456659 717 ntBASIC22.56■■□□□ 1.2
TSPAN3O60637 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.56■■□□□ 1.2
TSPAN3O60637 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.56■■□□□ 1.2
TSPAN3O60637 AC104564.3-201ENST00000582367 638 ntBASIC22.56■■□□□ 1.2
TSPAN3O60637 AC068587.7-201ENST00000641602 218 ntBASIC22.56■■□□□ 1.2
TSPAN3O60637 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TSPAN3O60637 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
TSPAN3O60637 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TSPAN3O60637 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TSPAN3O60637 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.56■■□□□ 1.2
TSPAN3O60637 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.56■■□□□ 1.2
TSPAN3O60637 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TSPAN3O60637 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TSPAN3O60637 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TSPAN3O60637 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.55■■□□□ 1.2
TSPAN3O60637 AL354811.1-201ENST00000610286 706 ntBASIC22.55■■□□□ 1.2
TSPAN3O60637 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.55■■□□□ 1.2
TSPAN3O60637 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.55■■□□□ 1.2
TSPAN3O60637 AC087239.1-201ENST00000622671 572 ntBASIC22.55■■□□□ 1.2
TSPAN3O60637 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.55■■□□□ 1.2
TSPAN3O60637 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
TSPAN3O60637 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.55■■□□□ 1.2
TSPAN3O60637 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TSPAN3O60637 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TSPAN3O60637 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.55■■□□□ 1.2
TSPAN3O60637 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TSPAN3O60637 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TSPAN3O60637 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.54■■□□□ 1.2
TSPAN3O60637 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TSPAN3O60637 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.54■■□□□ 1.2
TSPAN3O60637 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TSPAN3O60637 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TSPAN3O60637 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TSPAN3O60637 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TSPAN3O60637 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.54■■□□□ 1.2
TSPAN3O60637 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.54■■□□□ 1.2
TSPAN3O60637 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.54■■□□□ 1.2
TSPAN3O60637 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TSPAN3O60637 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TSPAN3O60637 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TSPAN3O60637 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
TSPAN3O60637 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TSPAN3O60637 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TSPAN3O60637 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TSPAN3O60637 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TSPAN3O60637 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TSPAN3O60637 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
TSPAN3O60637 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.53■■□□□ 1.2
TSPAN3O60637 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.53■■□□□ 1.2
TSPAN3O60637 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.53■■□□□ 1.2
TSPAN3O60637 YBX1P1-201ENST00000445822 960 ntBASIC22.53■■□□□ 1.2
TSPAN3O60637 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.53■■□□□ 1.2
TSPAN3O60637 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.53■■□□□ 1.2
TSPAN3O60637 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TSPAN3O60637 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.53■■□□□ 1.2
TSPAN3O60637 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
TSPAN3O60637 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TSPAN3O60637 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms