Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.29■■□□□ 1.32
TBC1D4O60343 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.29■■□□□ 1.32
TBC1D4O60343 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.29■■□□□ 1.32
TBC1D4O60343 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TBC1D4O60343 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.29■■□□□ 1.32
TBC1D4O60343 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.29■■□□□ 1.32
TBC1D4O60343 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D4O60343 AC092068.2-201ENST00000590491 1708 ntBASIC23.29■■□□□ 1.32
TBC1D4O60343 NTF6G-201ENST00000591094 616 ntBASIC23.29■■□□□ 1.32
TBC1D4O60343 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
TBC1D4O60343 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D4O60343 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TBC1D4O60343 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TBC1D4O60343 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TBC1D4O60343 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D4O60343 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.28■■□□□ 1.32
TBC1D4O60343 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TBC1D4O60343 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
TBC1D4O60343 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D4O60343 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.28■■□□□ 1.32
TBC1D4O60343 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D4O60343 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D4O60343 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.28■■□□□ 1.32
TBC1D4O60343 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TBC1D4O60343 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.28■■□□□ 1.32
TBC1D4O60343 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D4O60343 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D4O60343 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TBC1D4O60343 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
TBC1D4O60343 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TBC1D4O60343 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D4O60343 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D4O60343 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.27■■□□□ 1.32
TBC1D4O60343 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.27■■□□□ 1.32
TBC1D4O60343 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC23.27■■□□□ 1.32
TBC1D4O60343 SMUG1P1-201ENST00000590640 811 ntBASIC23.27■■□□□ 1.32
TBC1D4O60343 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.27■■□□□ 1.32
TBC1D4O60343 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D4O60343 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D4O60343 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.27■■□□□ 1.32
TBC1D4O60343 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.27■■□□□ 1.32
TBC1D4O60343 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.27■■□□□ 1.32
TBC1D4O60343 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TBC1D4O60343 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.26■■□□□ 1.31
TBC1D4O60343 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.26■■□□□ 1.31
TBC1D4O60343 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.26■■□□□ 1.31
TBC1D4O60343 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.26■■□□□ 1.31
TBC1D4O60343 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.26■■□□□ 1.31
TBC1D4O60343 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TBC1D4O60343 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.26■■□□□ 1.31
TBC1D4O60343 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.26■■□□□ 1.31
TBC1D4O60343 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TBC1D4O60343 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TBC1D4O60343 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.25■■□□□ 1.31
TBC1D4O60343 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
TBC1D4O60343 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.25■■□□□ 1.31
TBC1D4O60343 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
TBC1D4O60343 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D4O60343 DUSP8P3-201ENST00000399571 1760 ntBASIC23.25■■□□□ 1.31
TBC1D4O60343 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.25■■□□□ 1.31
TBC1D4O60343 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.25■■□□□ 1.31
TBC1D4O60343 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.25■■□□□ 1.31
TBC1D4O60343 KRT18P61-201ENST00000585825 1298 ntBASIC23.25■■□□□ 1.31
TBC1D4O60343 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TBC1D4O60343 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D4O60343 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
TBC1D4O60343 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.24■■□□□ 1.31
TBC1D4O60343 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D4O60343 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
TBC1D4O60343 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.24■■□□□ 1.31
TBC1D4O60343 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D4O60343 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D4O60343 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.24■■□□□ 1.31
TBC1D4O60343 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TBC1D4O60343 OXCT2P1-201ENST00000447263 1535 ntBASIC23.23■■□□□ 1.31
TBC1D4O60343 BX005040.4-201ENST00000637145 1518 ntBASIC23.23■■□□□ 1.31
TBC1D4O60343 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.23■■□□□ 1.31
TBC1D4O60343 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D4O60343 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D4O60343 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.23■■□□□ 1.31
TBC1D4O60343 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.23■■□□□ 1.31
TBC1D4O60343 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.23■■□□□ 1.31
TBC1D4O60343 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.23■■□□□ 1.31
TBC1D4O60343 AL137784.2-201ENST00000607332 1000 ntBASIC23.23■■□□□ 1.31
TBC1D4O60343 AC087239.1-201ENST00000622671 572 ntBASIC23.23■■□□□ 1.31
TBC1D4O60343 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.23■■□□□ 1.31
TBC1D4O60343 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D4O60343 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.23■■□□□ 1.31
TBC1D4O60343 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TBC1D4O60343 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D4O60343 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TBC1D4O60343 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms