Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TO15178 AC008764.7-201ENST00000593779 1081 ntBASIC20.21■□□□□ 0.83
TO15178 CA15P2-201ENST00000611168 834 ntBASIC20.21■□□□□ 0.83
TO15178 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TO15178 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TO15178 AC087742.1-201ENST00000575880 1738 ntBASIC20.21■□□□□ 0.83
TO15178 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TO15178 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TO15178 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.21■□□□□ 0.83
TO15178 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.2■□□□□ 0.82
TO15178 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.2■□□□□ 0.82
TO15178 AC099791.1-201ENST00000416440 715 ntBASIC20.2■□□□□ 0.82
TO15178 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TO15178 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TO15178 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TO15178 C1orf229-201ENST00000623686 2258 ntBASIC20.2■□□□□ 0.82
TO15178 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TO15178 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TO15178 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TO15178 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TO15178 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TO15178 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TO15178 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.19■□□□□ 0.82
TO15178 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TO15178 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TO15178 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.18■□□□□ 0.82
TO15178 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TO15178 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TO15178 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TO15178 AC142381.2-201ENST00000566120 298 ntBASIC20.18■□□□□ 0.82
TO15178 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TO15178 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.18■□□□□ 0.82
TO15178 AC087239.1-201ENST00000622671 572 ntBASIC20.18■□□□□ 0.82
TO15178 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TO15178 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.18■□□□□ 0.82
TO15178 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TO15178 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.18■□□□□ 0.82
TO15178 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TO15178 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.18■□□□□ 0.82
TO15178 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.17■□□□□ 0.82
TO15178 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TO15178 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TO15178 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.17■□□□□ 0.82
TO15178 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.17■□□□□ 0.82
TO15178 AC010141.3-201ENST00000456659 717 ntBASIC20.17■□□□□ 0.82
TO15178 AC126544.1-201ENST00000580842 1059 ntBASIC20.17■□□□□ 0.82
TO15178 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.17■□□□□ 0.82
TO15178 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TO15178 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TO15178 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TO15178 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TO15178 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.17■□□□□ 0.82
TO15178 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TO15178 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TO15178 AC012676.1-201ENST00000574705 1949 ntBASIC20.16■□□□□ 0.82
TO15178 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.16■□□□□ 0.82
TO15178 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TO15178 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.16■□□□□ 0.82
TO15178 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TO15178 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.16■□□□□ 0.82
TO15178 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
TO15178 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TO15178 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TO15178 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.15■□□□□ 0.82
TO15178 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.15■□□□□ 0.82
TO15178 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 IGHV3-19-201ENST00000521488 291 ntBASIC20.15■□□□□ 0.82
TO15178 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.15■□□□□ 0.82
TO15178 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.15■□□□□ 0.82
TO15178 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TO15178 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.15■□□□□ 0.82
TO15178 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TO15178 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
TO15178 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 AC127496.7-201ENST00000625110 1798 ntBASIC20.15■□□□□ 0.82
TO15178 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.15■□□□□ 0.82
TO15178 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TO15178 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TO15178 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
TO15178 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TO15178 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TO15178 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.14■□□□□ 0.81
TO15178 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TO15178 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms