Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	IRC21	YMR073C	606 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YNL097W-A	YNL097W-A	156 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YNL122C	YNL122C	348 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YNL144W-A	YNL144W-A	84 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	TMA16	YOR252W	537 nt		5.69	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	FZO1	YBR179C	2568 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	GTF1	YGR102C	552 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YHL018W	YHL018W	363 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YMR099C	YMR099C	894 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	FMP23	YBR047W	528 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	CDC28	YBR160W	897 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	ADE3	YGR204W	2841 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	TRM11	YOL124C	1302 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	DSF1	YEL070W	1509 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YNR073C	YNR073C	1509 nt		5.68	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RPN4	YDL020C	1596 nt		5.67	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	ECM11	YDR446W	909 nt		5.67	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YBL059W	YBL059W	582 nt		5.67	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	SNZ2	YNL333W	897 nt		5.67	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YOR029W	YOR029W	336 nt		5.67	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	CDC21	YOR074C	915 nt		5.67	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RAD24	YER173W	1980 nt		5.67	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YBR139W	YBR139W	1527 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	PEX10	YDR265W	1014 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	ISC10	YER180C	804 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	HLJ1	YMR161W	675 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	NIS1	YNL078W	1224 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	FYV12	YOR183W	390 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	SPR2	YOR214C	711 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RET3	YPL010W	570 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YCL002C	YCL002C	792 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	RPT4	YOR259C	1314 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	SIA1	YOR137C	1869 nt		5.66	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	MKS1	YNL076W	1755 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	PRM7	YDL039C	2097 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	ALG2	YGL065C	1512 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	MGT1	YDL200C	567 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	PRP18	YGR006W	756 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	LOH1	YJL038C	660 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	PAU17	YLL025W	375 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	TFS1	YLR178C	660 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YMR082C	YMR082C	357 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	LEM3	YNL323W	1245 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	MAP2	YBL091C	1266 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	YBR051W	YBR051W	351 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	SHE3	YBR130C	1278 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	MRPL27	YBR282W	441 nt		5.65	□□□□□ -1.5
TY4B-P	A0A0B7P3V8	UBP9	YER098W	2265 nt		5.65	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	DUR1,2	YBR208C	5508 nt		5.65	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	PMT5	YDL093W	2232 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	RFA1	YAR007C	1866 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	MSC7	YHR039C	1935 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	GDS1	YOR355W	1569 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	HSP78	YDR258C	2436 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	IFM1	YOL023W	2031 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	ADE6	YGR061C	4077 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	WBP1	YEL002C	1293 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YEL030C-A	YEL030C-A	315 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YER006C-A	YER006C-A	318 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	PHB1	YGR132C	864 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	DOT5	YIL010W	648 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	RPS5	YJR123W	678 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	CAP1	YKL007W	807 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YMR158W-B	YMR158W-B	321 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	IGO1	YNL157W	507 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	RIB4	YOL143C	510 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	CUE5	YOR042W	1236 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	POL30	YBR088C	777 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	SEG2	YKL105C	3399 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	GLO3	YER122C	1482 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	NOT3	YIL038C	2511 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	GRS1	YBR121C	2004 nt		5.64	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	PRP43	YGL120C	2304 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	RHB1	YCR027C	630 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YDL050C	YDL050C	372 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	DIG2	YDR480W	972 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	SCS2	YER120W	735 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YGR160W	YGR160W	612 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	PEX21	YGR239C	867 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	SUP19	tS(UGA)E	82 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	SUP17	tS(UGA)I	82 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	SUP16	tS(UGA)P	82 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	DCN1	YLR128W	810 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YMR193C-A	YMR193C-A	387 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YNL042W-B	YNL042W-B	258 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	UTP23	YOR004W	765 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	SAM4	YPL273W	978 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	TRM82	YDR165W	1335 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	TRM13	YOL125W	1431 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YTA6	YPL074W	2265 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	MIC60	YKR016W	1623 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	ACC1	YNR016C	6702 nt		5.63	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	IMA3	YIL172C	1770 nt		5.62	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	IMA4	YJL221C	1770 nt		5.62	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	GRX3	YDR098C	858 nt		5.62	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	VPS74	YDR372C	1038 nt		5.62	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	YER148W-A	YER148W-A	579 nt		5.62	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	RME1	YGR044C	903 nt		5.62	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	GTR2	YGR163W	1026 nt		5.62	□□□□□ -1.51
TY4B-P	A0A0B7P3V8	TIM10	YHR005C-A	282 nt		5.62	□□□□□ -1.51

Retrieved 100 of 7,029 protein–RNA pairs in 37.2 ms