Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV12-1A0A0B4J245 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 AGPS-202ENST00000409888 815 ntTSL 4 BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 AC131274.2-201ENST00000580697 1507 ntBASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV12-1A0A0B4J245 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV12-1A0A0B4J245 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 AC060814.1-201ENST00000554326 538 ntBASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV12-1A0A0B4J245 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 Z98882.1-201ENST00000622160 2253 ntBASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV12-1A0A0B4J245 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 AC007952.6-201ENST00000573168 2673 ntBASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 AC003957.1-201ENST00000625108 2673 ntBASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV12-1A0A0B4J245 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 AL592295.1-201ENST00000400984 884 ntBASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV12-1A0A0B4J245 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms