Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.86■■□□□ 1.09
SNX11Q9Y5W9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNX11Q9Y5W9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SNX11Q9Y5W9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SNX11Q9Y5W9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.86■■□□□ 1.09
SNX11Q9Y5W9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SNX11Q9Y5W9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 ABCB10P4-201ENST00000566803 2184 ntBASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SNX11Q9Y5W9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNX11Q9Y5W9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.83■■□□□ 1.09
SNX11Q9Y5W9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.83■■□□□ 1.09
SNX11Q9Y5W9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.83■■□□□ 1.09
SNX11Q9Y5W9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SNX11Q9Y5W9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.83■■□□□ 1.09
SNX11Q9Y5W9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SNX11Q9Y5W9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX11Q9Y5W9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNX11Q9Y5W9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.82■■□□□ 1.08
SNX11Q9Y5W9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX11Q9Y5W9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX11Q9Y5W9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNX11Q9Y5W9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.82■■□□□ 1.08
SNX11Q9Y5W9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.81■■□□□ 1.08
SNX11Q9Y5W9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX11Q9Y5W9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX11Q9Y5W9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.81■■□□□ 1.08
SNX11Q9Y5W9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.81■■□□□ 1.08
SNX11Q9Y5W9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX11Q9Y5W9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNX11Q9Y5W9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.81■■□□□ 1.08
SNX11Q9Y5W9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SNX11Q9Y5W9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
SNX11Q9Y5W9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 KRT18P61-201ENST00000585825 1298 ntBASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNX11Q9Y5W9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNX11Q9Y5W9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms