Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
RTCBQ9Y3I0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC28.08■■■□□ 2.09
RTCBQ9Y3I0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RTCBQ9Y3I0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RTCBQ9Y3I0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC28.07■■■□□ 2.08
RTCBQ9Y3I0 CD99P1-205ENST00000527459 561 ntBASIC28.07■■■□□ 2.08
RTCBQ9Y3I0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RTCBQ9Y3I0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
RTCBQ9Y3I0 AC004687.1-201ENST00000579003 1625 ntBASIC28.07■■■□□ 2.08
RTCBQ9Y3I0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 AC010141.3-201ENST00000456659 717 ntBASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 AC079140.4-201ENST00000507448 529 ntBASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 AC087239.1-201ENST00000622671 572 ntBASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RTCBQ9Y3I0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC28.05■■■□□ 2.08
RTCBQ9Y3I0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
RTCBQ9Y3I0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
RTCBQ9Y3I0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
RTCBQ9Y3I0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.05■■■□□ 2.08
RTCBQ9Y3I0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.05■■■□□ 2.08
RTCBQ9Y3I0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
RTCBQ9Y3I0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 AC142086.2-201ENST00000569753 217 ntBASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
RTCBQ9Y3I0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
RTCBQ9Y3I0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTCBQ9Y3I0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTCBQ9Y3I0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTCBQ9Y3I0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.02■■■□□ 2.08
RTCBQ9Y3I0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.02■■■□□ 2.08
RTCBQ9Y3I0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 MFSD11-216ENST00000590393 1141 ntBASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTCBQ9Y3I0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28■■■□□ 2.07
RTCBQ9Y3I0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
RTCBQ9Y3I0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RTCBQ9Y3I0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28■■■□□ 2.07
RTCBQ9Y3I0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC28■■■□□ 2.07
RTCBQ9Y3I0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28■■■□□ 2.07
RTCBQ9Y3I0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
RTCBQ9Y3I0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.99■■■□□ 2.07
RTCBQ9Y3I0 AL121832.2-201ENST00000610979 668 ntBASIC27.99■■■□□ 2.07
RTCBQ9Y3I0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.99■■■□□ 2.07
RTCBQ9Y3I0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 TSPY20P-201ENST00000450910 630 ntBASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.98■■■□□ 2.07
RTCBQ9Y3I0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms