Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.26■□□□□ 0.51
CSPG4Q6UVK1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.26■□□□□ 0.51
CSPG4Q6UVK1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4Q6UVK1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CSPG4Q6UVK1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.26■□□□□ 0.51
CSPG4Q6UVK1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4Q6UVK1 FP325331.1-202ENST00000623531 1380 ntBASIC18.26■□□□□ 0.51
CSPG4Q6UVK1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CSPG4Q6UVK1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4Q6UVK1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4Q6UVK1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.25■□□□□ 0.51
CSPG4Q6UVK1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4Q6UVK1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4Q6UVK1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4Q6UVK1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 AC145676.1-201ENST00000514988 2004 ntBASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 AC083906.2-201ENST00000511578 360 ntBASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.24■□□□□ 0.51
CSPG4Q6UVK1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 GUSBP6-202ENST00000438529 1198 ntBASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 AC087239.1-201ENST00000622671 572 ntBASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 AL050303.2-201ENST00000619798 666 ntBASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSPG4Q6UVK1 AC069152.1-201ENST00000438030 544 ntBASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 AC011767.1-201ENST00000617410 1153 ntBASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSPG4Q6UVK1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 KRT18P6-201ENST00000555540 1265 ntBASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.21■□□□□ 0.51
CSPG4Q6UVK1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 AL138781.1-201ENST00000566567 1274 ntBASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSPG4Q6UVK1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 LINC01529-204ENST00000636474 1715 ntBASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSPG4Q6UVK1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms