Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CDKAL1Q5VV42 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDKAL1Q5VV42 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CDKAL1Q5VV42 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.14■■□□□ 1.46
CDKAL1Q5VV42 AC004687.1-201ENST00000579003 1625 ntBASIC24.14■■□□□ 1.46
CDKAL1Q5VV42 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CDKAL1Q5VV42 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.14■■□□□ 1.46
CDKAL1Q5VV42 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.14■■□□□ 1.46
CDKAL1Q5VV42 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 CA15P2-201ENST00000611168 834 ntBASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 C17orf82-201ENST00000623772 1530 ntBASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 AC010542.4-201ENST00000563151 1910 ntBASIC24.14■■□□□ 1.45
CDKAL1Q5VV42 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.13■■□□□ 1.45
CDKAL1Q5VV42 Z92544.1-202ENST00000571933 1220 ntBASIC24.13■■□□□ 1.45
CDKAL1Q5VV42 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDKAL1Q5VV42 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.13■■□□□ 1.45
CDKAL1Q5VV42 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CDKAL1Q5VV42 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CDKAL1Q5VV42 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
CDKAL1Q5VV42 AL137060.1-201ENST00000618151 2648 ntBASIC24.13■■□□□ 1.45
CDKAL1Q5VV42 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CDKAL1Q5VV42 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CDKAL1Q5VV42 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.1■■□□□ 1.45
CDKAL1Q5VV42 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
CDKAL1Q5VV42 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 KRT125P-201ENST00000546827 989 ntBASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 MTDHP2-201ENST00000601468 714 ntBASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 MIR4787-201ENST00000607364 84 ntBASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
CDKAL1Q5VV42 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
CDKAL1Q5VV42 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CDKAL1Q5VV42 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.07■■□□□ 1.44
CDKAL1Q5VV42 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.07■■□□□ 1.44
CDKAL1Q5VV42 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.07■■□□□ 1.44
CDKAL1Q5VV42 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms