Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13DQ5THJ4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13DQ5THJ4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13DQ5THJ4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
VPS13DQ5THJ4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VPS13DQ5THJ4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.02■□□□□ -0
VPS13DQ5THJ4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS13DQ5THJ4 TSPY20P-201ENST00000450910 630 ntBASIC15.02■□□□□ -0
VPS13DQ5THJ4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VPS13DQ5THJ4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC15.02■□□□□ -0
VPS13DQ5THJ4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS13DQ5THJ4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.02■□□□□ -0
VPS13DQ5THJ4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS13DQ5THJ4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.02■□□□□ -0
VPS13DQ5THJ4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
VPS13DQ5THJ4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS13DQ5THJ4 GPX1P1-201ENST00000388829 606 ntBASIC15.02□□□□□ -0.01
VPS13DQ5THJ4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.02□□□□□ -0.01
VPS13DQ5THJ4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.02□□□□□ -0.01
VPS13DQ5THJ4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS13DQ5THJ4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 AC138932.3-201ENST00000567634 1902 ntBASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 AC142086.2-201ENST00000569753 217 ntBASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 KRT18P11-201ENST00000435214 1283 ntBASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
VPS13DQ5THJ4 BX005040.4-201ENST00000637145 1518 ntBASIC15□□□□□ -0.01
VPS13DQ5THJ4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15□□□□□ -0.01
VPS13DQ5THJ4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15□□□□□ -0.01
VPS13DQ5THJ4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15□□□□□ -0.01
VPS13DQ5THJ4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15□□□□□ -0.01
VPS13DQ5THJ4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15□□□□□ -0.01
VPS13DQ5THJ4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
VPS13DQ5THJ4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 AC006970.2-201ENST00000450065 779 ntBASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 KRT19P1-201ENST00000405746 1186 ntBASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 UBE2DNL-204ENST00000602536 740 ntBASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 CNN2P6-201ENST00000439038 900 ntBASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 MIR4651-201ENST00000582622 73 ntBASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 FP325331.1-202ENST00000623531 1380 ntBASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
VPS13DQ5THJ4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 AC098934.4-201ENST00000564127 592 ntBASIC14.98□□□□□ -0.01
VPS13DQ5THJ4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms