Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDX1P52945 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.36■■□□□ 1.01
PDX1P52945 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDX1P52945 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDX1P52945 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PDX1P52945 FP325331.1-202ENST00000623531 1380 ntBASIC21.36■■□□□ 1.01
PDX1P52945 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.35■■□□□ 1.01
PDX1P52945 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.35■■□□□ 1.01
PDX1P52945 NTF6G-201ENST00000591094 616 ntBASIC21.35■■□□□ 1.01
PDX1P52945 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDX1P52945 LINC02228-203ENST00000641970 1355 ntBASIC21.35■■□□□ 1.01
PDX1P52945 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.34■■□□□ 1.01
PDX1P52945 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
PDX1P52945 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PDX1P52945 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.34■■□□□ 1.01
PDX1P52945 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.34■■□□□ 1.01
PDX1P52945 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PDX1P52945 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PDX1P52945 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDX1P52945 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDX1P52945 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
PDX1P52945 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.33■■□□□ 1.01
PDX1P52945 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PDX1P52945 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
PDX1P52945 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDX1P52945 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDX1P52945 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDX1P52945 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.33■■□□□ 1.01
PDX1P52945 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDX1P52945 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDX1P52945 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PDX1P52945 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDX1P52945 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PDX1P52945 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PDX1P52945 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.32■■□□□ 1
PDX1P52945 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDX1P52945 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.32■■□□□ 1
PDX1P52945 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.32■■□□□ 1
PDX1P52945 AP005435.1-201ENST00000529293 1178 ntBASIC21.32■■□□□ 1
PDX1P52945 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.32■■□□□ 1
PDX1P52945 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDX1P52945 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PDX1P52945 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.32■■□□□ 1
PDX1P52945 AC144652.1-201ENST00000609974 1624 ntBASIC21.32■■□□□ 1
PDX1P52945 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDX1P52945 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDX1P52945 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDX1P52945 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDX1P52945 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.31■■□□□ 1
PDX1P52945 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PDX1P52945 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.31■■□□□ 1
PDX1P52945 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.31■■□□□ 1
PDX1P52945 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.31■■□□□ 1
PDX1P52945 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDX1P52945 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.31■■□□□ 1
PDX1P52945 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.31■■□□□ 1
PDX1P52945 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDX1P52945 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDX1P52945 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDX1P52945 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDX1P52945 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDX1P52945 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDX1P52945 LINC01529-204ENST00000636474 1715 ntBASIC21.3■■□□□ 1
PDX1P52945 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PDX1P52945 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.3■■□□□ 1
PDX1P52945 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.3■■□□□ 1
PDX1P52945 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PDX1P52945 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.3■■□□□ 1
PDX1P52945 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDX1P52945 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.3■■□□□ 1
PDX1P52945 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.3■■□□□ 1
PDX1P52945 KRT18P61-201ENST00000585825 1298 ntBASIC21.3■■□□□ 1
PDX1P52945 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PDX1P52945 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PDX1P52945 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDX1P52945 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.3■■□□□ 1
PDX1P52945 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.3■■□□□ 1
PDX1P52945 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
PDX1P52945 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDX1P52945 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.29■■□□□ 1
PDX1P52945 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms