Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC005181.1-201ENST00000604782 1256 ntBASIC27.4■■□□□ 1.98
KCNA3P22001 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
KCNA3P22001 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
KCNA3P22001 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
KCNA3P22001 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
KCNA3P22001 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
KCNA3P22001 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
KCNA3P22001 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
KCNA3P22001 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
KCNA3P22001 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.97
KCNA3P22001 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
KCNA3P22001 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
KCNA3P22001 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
KCNA3P22001 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC27.38■■□□□ 1.97
KCNA3P22001 AC079140.4-201ENST00000507448 529 ntBASIC27.38■■□□□ 1.97
KCNA3P22001 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
KCNA3P22001 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
KCNA3P22001 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
KCNA3P22001 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
KCNA3P22001 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KCNA3P22001 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
KCNA3P22001 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
KCNA3P22001 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC27.37■■□□□ 1.97
KCNA3P22001 ARL16-209ENST00000573715 763 ntTSL 3 BASIC27.37■■□□□ 1.97
KCNA3P22001 ARL16-211ENST00000576135 694 ntTSL 3 BASIC27.37■■□□□ 1.97
KCNA3P22001 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
KCNA3P22001 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.37■■□□□ 1.97
KCNA3P22001 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
KCNA3P22001 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC27.36■■□□□ 1.97
KCNA3P22001 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.36■■□□□ 1.97
KCNA3P22001 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.36■■□□□ 1.97
KCNA3P22001 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
KCNA3P22001 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
KCNA3P22001 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.35■■□□□ 1.97
KCNA3P22001 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KCNA3P22001 AC007322.1-201ENST00000426983 750 ntBASIC27.35■■□□□ 1.97
KCNA3P22001 AC073210.2-201ENST00000430369 194 ntBASIC27.35■■□□□ 1.97
KCNA3P22001 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC27.35■■□□□ 1.97
KCNA3P22001 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.35■■□□□ 1.97
KCNA3P22001 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KCNA3P22001 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
KCNA3P22001 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
KCNA3P22001 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KCNA3P22001 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KCNA3P22001 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KCNA3P22001 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
KCNA3P22001 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC27.34■■□□□ 1.97
KCNA3P22001 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.34■■□□□ 1.97
KCNA3P22001 AC098934.4-201ENST00000564127 592 ntBASIC27.34■■□□□ 1.97
KCNA3P22001 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC27.34■■□□□ 1.97
KCNA3P22001 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
KCNA3P22001 PFKL-212ENST00000628044 129 ntTSL 3 BASIC27.34■■□□□ 1.97
KCNA3P22001 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KCNA3P22001 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KCNA3P22001 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KCNA3P22001 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
KCNA3P22001 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.33■■□□□ 1.97
KCNA3P22001 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
KCNA3P22001 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.33■■□□□ 1.97
KCNA3P22001 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.33■■□□□ 1.97
KCNA3P22001 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KCNA3P22001 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.33■■□□□ 1.97
KCNA3P22001 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
KCNA3P22001 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.32■■□□□ 1.96
KCNA3P22001 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
KCNA3P22001 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
KCNA3P22001 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.32■■□□□ 1.96
KCNA3P22001 AC104187.1-201ENST00000607510 612 ntBASIC27.32■■□□□ 1.96
KCNA3P22001 AC133041.1-202ENST00000642053 222 ntBASIC27.32■■□□□ 1.96
KCNA3P22001 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNA3P22001 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
KCNA3P22001 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
KCNA3P22001 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.31■■□□□ 1.96
KCNA3P22001 SLC29A4P1-201ENST00000398760 971 ntBASIC27.31■■□□□ 1.96
KCNA3P22001 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.31■■□□□ 1.96
KCNA3P22001 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.31■■□□□ 1.96
KCNA3P22001 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC27.31■■□□□ 1.96
KCNA3P22001 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.31■■□□□ 1.96
KCNA3P22001 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.31■■□□□ 1.96
KCNA3P22001 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
KCNA3P22001 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.31■■□□□ 1.96
KCNA3P22001 AC087239.1-201ENST00000622671 572 ntBASIC27.31■■□□□ 1.96
KCNA3P22001 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.3■■□□□ 1.96
KCNA3P22001 AC135731.1-201ENST00000569415 2548 ntBASIC27.3■■□□□ 1.96
KCNA3P22001 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
KCNA3P22001 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
KCNA3P22001 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.3■■□□□ 1.96
KCNA3P22001 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC27.3■■□□□ 1.96
KCNA3P22001 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
KCNA3P22001 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
KCNA3P22001 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.3■■□□□ 1.96
KCNA3P22001 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
KCNA3P22001 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 POU5F1P3-201ENST00000428824 1078 ntBASIC27.29■■□□□ 1.96
KCNA3P22001 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KCNA3P22001 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC27.29■■□□□ 1.96
KCNA3P22001 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms