Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.19■□□□□ 0.34
CD28P10747 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.19■□□□□ 0.34
CD28P10747 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CD28P10747 AL139125.2-201ENST00000623134 1869 ntBASIC17.19■□□□□ 0.34
CD28P10747 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.19■□□□□ 0.34
CD28P10747 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.19■□□□□ 0.34
CD28P10747 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 KRT18P14-201ENST00000534205 1250 ntBASIC17.19■□□□□ 0.34
CD28P10747 AL137784.2-201ENST00000607332 1000 ntBASIC17.19■□□□□ 0.34
CD28P10747 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CD28P10747 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CD28P10747 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.19■□□□□ 0.34
CD28P10747 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CD28P10747 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.19■□□□□ 0.34
CD28P10747 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.19■□□□□ 0.34
CD28P10747 AC004687.1-201ENST00000579003 1625 ntBASIC17.18■□□□□ 0.34
CD28P10747 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD28P10747 LINC02228-203ENST00000641970 1355 ntBASIC17.18■□□□□ 0.34
CD28P10747 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CD28P10747 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD28P10747 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.18■□□□□ 0.34
CD28P10747 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD28P10747 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.18■□□□□ 0.34
CD28P10747 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.18■□□□□ 0.34
CD28P10747 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.18■□□□□ 0.34
CD28P10747 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CD28P10747 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.18■□□□□ 0.34
CD28P10747 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.18■□□□□ 0.34
CD28P10747 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.18■□□□□ 0.34
CD28P10747 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.18■□□□□ 0.34
CD28P10747 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD28P10747 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD28P10747 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CD28P10747 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD28P10747 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.17■□□□□ 0.34
CD28P10747 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CD28P10747 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.17■□□□□ 0.34
CD28P10747 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.17■□□□□ 0.34
CD28P10747 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD28P10747 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.17■□□□□ 0.34
CD28P10747 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.17■□□□□ 0.34
CD28P10747 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.17■□□□□ 0.34
CD28P10747 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.17■□□□□ 0.34
CD28P10747 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.17■□□□□ 0.34
CD28P10747 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD28P10747 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD28P10747 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CD28P10747 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD28P10747 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CD28P10747 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
CD28P10747 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 ABCB10P4-201ENST00000566803 2184 ntBASIC17.16■□□□□ 0.34
CD28P10747 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.16■□□□□ 0.34
CD28P10747 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.16■□□□□ 0.34
CD28P10747 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CD28P10747 NTF6G-201ENST00000591094 616 ntBASIC17.16■□□□□ 0.34
CD28P10747 RARRES2P11-201ENST00000635158 484 ntBASIC17.16■□□□□ 0.34
CD28P10747 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.16■□□□□ 0.34
CD28P10747 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.16■□□□□ 0.34
CD28P10747 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CD28P10747 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.15■□□□□ 0.34
CD28P10747 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CD28P10747 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD28P10747 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD28P10747 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CD28P10747 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CD28P10747 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CD28P10747 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
CD28P10747 AC090192.1-201ENST00000517740 490 ntBASIC17.15■□□□□ 0.34
CD28P10747 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.15■□□□□ 0.34
CD28P10747 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.15■□□□□ 0.34
CD28P10747 TERF1P2-201ENST00000583350 1212 ntBASIC17.15■□□□□ 0.34
CD28P10747 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.15■□□□□ 0.34
CD28P10747 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD28P10747 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.15■□□□□ 0.34
CD28P10747 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CD28P10747 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CD28P10747 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD28P10747 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CD28P10747 AL353803.4-201ENST00000565882 1934 ntBASIC17.14■□□□□ 0.33
CD28P10747 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD28P10747 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CD28P10747 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CD28P10747 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.14■□□□□ 0.33
CD28P10747 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms