Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
DffbO54788 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DffbO54788 Gm43530-201ENSMUST00000195920 274 ntBASIC16.7■□□□□ 0.26
DffbO54788 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.7■□□□□ 0.26
DffbO54788 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.7■□□□□ 0.26
DffbO54788 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DffbO54788 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DffbO54788 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
DffbO54788 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DffbO54788 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DffbO54788 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
DffbO54788 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.69■□□□□ 0.26
DffbO54788 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.69■□□□□ 0.26
DffbO54788 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.69■□□□□ 0.26
DffbO54788 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DffbO54788 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
DffbO54788 Gm9870-201ENSMUST00000063874 645 ntBASIC16.68■□□□□ 0.26
DffbO54788 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
DffbO54788 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
DffbO54788 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.67■□□□□ 0.26
DffbO54788 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
DffbO54788 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
DffbO54788 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DffbO54788 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.66■□□□□ 0.26
DffbO54788 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DffbO54788 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.66■□□□□ 0.26
DffbO54788 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
DffbO54788 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
DffbO54788 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
DffbO54788 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.65■□□□□ 0.26
DffbO54788 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.65■□□□□ 0.26
DffbO54788 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.65■□□□□ 0.26
DffbO54788 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
DffbO54788 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
DffbO54788 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
DffbO54788 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Gm15820-201ENSMUST00000201566 728 ntBASIC16.64■□□□□ 0.25
DffbO54788 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.64■□□□□ 0.25
DffbO54788 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
DffbO54788 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms