Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav4-3A0A0B4J1K1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav4-3A0A0B4J1K1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav4-3A0A0B4J1K1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav4-3A0A0B4J1K1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav4-3A0A0B4J1K1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4-3A0A0B4J1K1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4-3A0A0B4J1K1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4-3A0A0B4J1K1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-3A0A0B4J1K1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms