Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-4-dv10A0A075B651 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Gm9870-201ENSMUST00000063874 645 ntBASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cap2-205ENSMUST00000225824 1634 ntBASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav4-4-dv10A0A075B651 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav4-4-dv10A0A075B651 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trav4-4-dv10A0A075B651 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Etf1-202ENSMUST00000180351 108 ntBASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav4-4-dv10A0A075B651 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav4-4-dv10A0A075B651 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 AA386476-201ENSMUST00000098781 1665 ntBASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav4-4-dv10A0A075B651 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav4-4-dv10A0A075B651 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms