Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 OR7E115P-201ENST00000382617 1024 ntBASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 GGT8P-201ENST00000418938 532 ntBASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 ACTG1P17-201ENST00000558391 1119 ntBASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 RN7SL556P-201ENST00000582856 298 ntBASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 AC140113.1-201ENST00000603467 169 ntBASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 AC007718.1-201ENST00000621078 280 ntBASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 AC009108.4-201ENST00000623284 2451 ntBASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.19□□□□□ -0.46
POLR2J2Q9GZM3 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 CAPN10-AS1-201ENST00000567819 4000 ntBASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC080013.1-204ENST00000607426 2185 ntBASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 BAK1P1-201ENST00000317045 636 ntBASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC234782.1-201ENST00000451950 919 ntBASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 CEP164P1-201ENST00000455142 418 ntBASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AP003170.2-201ENST00000544730 786 ntBASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 CSTP2-201ENST00000610599 398 ntBASIC12.18□□□□□ -0.46
POLR2J2Q9GZM3 AC244093.1-201ENST00000610837 814 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms