Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 CYP1A2-201ENST00000343932 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 CYP46A4P-201ENST00000414953 267 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AL596276.2-201ENST00000447525 331 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC125604.1-201ENST00000496255 707 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 RN7SL665P-201ENST00000578793 300 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC100757.4-201ENST00000626934 759 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 NAP1L6-202ENST00000641404 1222 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 SPRY4-201ENST00000344120 4938 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 HADH-210ENST00000626637 1774 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 Z98259.1-201ENST00000564261 1697 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 UBTFL8-201ENST00000426903 2112 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 AC018645.3-201ENST00000628855 2646 ntBASIC10.69□□□□□ -0.7
RAB40CQ96S21 COL8A1-201ENST00000261037 5705 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
RAB40CQ96S21 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AL133338.1-201ENST00000565695 1517 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 NEPRO-201ENST00000314400 4992 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 SRL-202ENST00000537996 1814 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AC007614.4-201ENST00000564048 1827 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 TEKT4P2-202ENST00000559466 1312 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 AL353593.1-201ENST00000602517 3955 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 GRN-222ENST00000639447 1314 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AC239868.1-201ENST00000369385 493 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 SNORD23-201ENST00000408876 110 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 RPE-208ENST00000436630 1128 ntTSL 2 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AC004898.1-201ENST00000451057 766 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC10.68□□□□□ -0.7
RAB40CQ96S21 AC108725.1-201ENST00000495472 409 ntBASIC10.68□□□□□ -0.7
RAB40CQ96S21 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
RAB40CQ96S21 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms