Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CSNK1DP48730 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 DEFA8P-201ENST00000457582 285 ntBASIC13.12□□□□□ -0.31
CSNK1DP48730 MARK2P17-201ENST00000498560 841 ntBASIC13.12□□□□□ -0.31
CSNK1DP48730 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 ANKRD26P1-203ENST00000569528 966 ntBASIC13.12□□□□□ -0.31
CSNK1DP48730 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.12□□□□□ -0.31
CSNK1DP48730 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 TRMT112P6-201ENST00000599234 372 ntBASIC13.12□□□□□ -0.31
CSNK1DP48730 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.12□□□□□ -0.31
CSNK1DP48730 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC13.12□□□□□ -0.31
CSNK1DP48730 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 AL031432.4-201ENST00000641729 2190 ntBASIC13.12□□□□□ -0.31
CSNK1DP48730 AL118506.1-201ENST00000601296 3082 ntBASIC13.12□□□□□ -0.31
CSNK1DP48730 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CSNK1DP48730 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CSNK1DP48730 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSNK1DP48730 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.11□□□□□ -0.31
CSNK1DP48730 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 AOC4P-203ENST00000566825 2289 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CSNK1DP48730 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 AC025538.1-201ENST00000510707 1486 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.11□□□□□ -0.31
CSNK1DP48730 AC102953.2-201ENST00000609755 3026 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CSNK1DP48730 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CSNK1DP48730 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CSNK1DP48730 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC13.11□□□□□ -0.31
CSNK1DP48730 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC13.11□□□□□ -0.31
CSNK1DP48730 AL359092.2-201ENST00000423330 585 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 RBMX2P5-201ENST00000424312 969 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC13.11□□□□□ -0.31
CSNK1DP48730 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 YBX1P3-201ENST00000468366 909 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 KRT18P42-201ENST00000505048 1255 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 AC010395.2-201ENST00000509899 904 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC13.11□□□□□ -0.31
CSNK1DP48730 AC023509.4-201ENST00000602306 775 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC13.11□□□□□ -0.31
CSNK1DP48730 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1DP48730 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CSNK1DP48730 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.11□□□□□ -0.31
CSNK1DP48730 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
CSNK1DP48730 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
CSNK1DP48730 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.11□□□□□ -0.31
CSNK1DP48730 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1DP48730 AC133919.3-201ENST00000621407 1804 ntBASIC13.11□□□□□ -0.31
CSNK1DP48730 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1DP48730 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1DP48730 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms