Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC091304.3-201ENST00000566500 716 ntBASIC14.07□□□□□ -0.16
O00370 AC012146.4-201ENST00000575546 271 ntBASIC14.07□□□□□ -0.16
O00370 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.07□□□□□ -0.16
O00370 AP005264.6-204ENST00000588436 719 ntBASIC14.07□□□□□ -0.16
O00370 TYMSP2-201ENST00000589501 424 ntBASIC14.07□□□□□ -0.16
O00370 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 AL160191.2-201ENST00000603975 601 ntBASIC14.07□□□□□ -0.16
O00370 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC14.07□□□□□ -0.16
O00370 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
O00370 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
O00370 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
O00370 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.07□□□□□ -0.16
O00370 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
O00370 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
O00370 AC011477.7-201ENST00000617163 1440 ntBASIC14.07□□□□□ -0.16
O00370 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC14.06□□□□□ -0.16
O00370 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.06□□□□□ -0.16
O00370 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
O00370 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC14.06□□□□□ -0.16
O00370 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC14.06□□□□□ -0.16
O00370 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
O00370 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC14.06□□□□□ -0.16
O00370 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
O00370 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.06□□□□□ -0.16
O00370 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC14.06□□□□□ -0.16
O00370 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.06□□□□□ -0.16
O00370 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.06□□□□□ -0.16
O00370 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
O00370 RPSAP12-201ENST00000435879 888 ntBASIC14.06□□□□□ -0.16
O00370 RN7SL147P-201ENST00000487345 298 ntBASIC14.06□□□□□ -0.16
O00370 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
O00370 MIR5091-201ENST00000578707 93 ntBASIC14.06□□□□□ -0.16
O00370 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC14.06□□□□□ -0.16
O00370 URAHP-205ENST00000610227 398 ntBASIC14.06□□□□□ -0.16
O00370 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
O00370 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC14.06□□□□□ -0.16
O00370 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC14.06□□□□□ -0.16
O00370 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC14.06□□□□□ -0.16
O00370 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC14.06□□□□□ -0.16
O00370 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
O00370 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC14.06□□□□□ -0.16
O00370 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.06□□□□□ -0.16
O00370 LINC00563-201ENST00000566370 1400 ntBASIC14.06□□□□□ -0.16
O00370 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC14.06□□□□□ -0.16
O00370 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
O00370 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.06□□□□□ -0.16
O00370 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
O00370 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.05□□□□□ -0.16
O00370 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 JAML-211ENST00000533261 1508 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.05□□□□□ -0.16
O00370 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 MAX-212ENST00000555932 1673 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC14.05□□□□□ -0.16
O00370 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC14.05□□□□□ -0.16
O00370 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
O00370 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.05□□□□□ -0.16
O00370 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC14.05□□□□□ -0.16
O00370 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC14.05□□□□□ -0.16
O00370 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.05□□□□□ -0.16
O00370 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC14.05□□□□□ -0.16
O00370 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms