Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
TNFRSF11AQ9Y6Q6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TNFRSF11AQ9Y6Q6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
TNFRSF11AQ9Y6Q6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
TNFRSF11AQ9Y6Q6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TNFRSF11AQ9Y6Q6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC27.19■■□□□ 1.94
TNFRSF11AQ9Y6Q6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TNFRSF11AQ9Y6Q6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.19■■□□□ 1.94
TNFRSF11AQ9Y6Q6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC27.18■■□□□ 1.94
TNFRSF11AQ9Y6Q6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TNFRSF11AQ9Y6Q6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
TNFRSF11AQ9Y6Q6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TNFRSF11AQ9Y6Q6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.17■■□□□ 1.94
TNFRSF11AQ9Y6Q6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
TNFRSF11AQ9Y6Q6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
TNFRSF11AQ9Y6Q6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TNFRSF11AQ9Y6Q6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TNFRSF11AQ9Y6Q6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
TNFRSF11AQ9Y6Q6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 DUSP8P5-201ENST00000422884 1815 ntBASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNFRSF11AQ9Y6Q6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 MPST-208ENST00000628507 698 ntTSL 5 BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
TNFRSF11AQ9Y6Q6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
TNFRSF11AQ9Y6Q6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
TNFRSF11AQ9Y6Q6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27.14■■□□□ 1.93
TNFRSF11AQ9Y6Q6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
TNFRSF11AQ9Y6Q6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
TNFRSF11AQ9Y6Q6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
TNFRSF11AQ9Y6Q6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 GRAMD4P2-201ENST00000423297 1097 ntBASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.12■■□□□ 1.93
TNFRSF11AQ9Y6Q6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 MIR935-201ENST00000401179 91 ntBASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 AC126544.1-201ENST00000580842 1059 ntBASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.11■■□□□ 1.93
TNFRSF11AQ9Y6Q6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.1■■□□□ 1.93
TNFRSF11AQ9Y6Q6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms